| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2415 |
|---|
| Symbol | |
|---|
| ID | 4808130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2884231 |
|---|
| End bp | 2884932 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640107828 |
|---|
| Product | cell wall hydrolase, SleB |
|---|
| Protein accession | YP_001038810 |
|---|
| Protein GI | 125974900 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
|---|
| TIGRFAM ID | [TIGR02869] spore cortex-lytic enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.528951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTTGA AGACATTTTG GAGAATACTT ATTCTTGCCG TTATATTTTT CATTGGCATA
CCGCTGTTTT TAAATGGCAG GTTCTTTATT GTACCAATTA CCGAAAGACT TGCTCCCAAC
ATGCAGAACG AGGATGTAGT GAGACTGCAG CAAAGGCTTA AGAACTGGGA ATATTATGAC
GGCAAAATAA CCGGAGTGTA TGATTTTAAA ACATATTTGG CAGTAAGGGA TTTTCAGAAA
ACATATAATT TGCCCGTAAC CGGTATTGCA GGGGAAGAAA CTTTGGCTGC GATGGGACTT
ACCACTCTTT CCCGGTGGAG TGAGGTCCGG GCACAATCAA GCCGGATAAG TGATGAACAG
CTTTTGGCAA GGGCGATTAA CGGGGAAGCC AGAGGAGAAC CCTACGAGGG ACAGGTGGCT
GTAGGTGCGG TTATTTTGAA CAGGACAAGG GACCCCAGAT TTCCCAAAAC CATTGCAGGG
GTTATATACC AGCCGGGAGC GTTTACGGCA GTTTCGGACG GTCAGATAAA TGTACCTATT
GACCCCAATT CAACTGTTGT GAAAGCTGCA AGAGACGCTT TGAACGGTTG GGATCCCACC
AATGGATGCA TATACTATTG GAATCCGGCA ACTGCAACCA GCAAATGGAT ATGGAGCAGA
AAGATAGTTA CAAAAATCGG AAAGCATTAT TTTGGAATAT GA
|
|---|
| Protein sequence | MFLKTFWRIL ILAVIFFIGI PLFLNGRFFI VPITERLAPN MQNEDVVRLQ QRLKNWEYYD
GKITGVYDFK TYLAVRDFQK TYNLPVTGIA GEETLAAMGL TTLSRWSEVR AQSSRISDEQ
LLARAINGEA RGEPYEGQVA VGAVILNRTR DPRFPKTIAG VIYQPGAFTA VSDGQINVPI
DPNSTVVKAA RDALNGWDPT NGCIYYWNPA TATSKWIWSR KIVTKIGKHY FGI
|
|---|
| |