| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2348 |
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| Symbol | |
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| ID | 4808982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2800406 |
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| End bp | 2803516 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640107755 |
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| Product | Ig-related protein |
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| Protein accession | YP_001038743 |
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| Protein GI | 125974833 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0040576 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATC TCAAAAAAGT GCTGGCAGTG TTAGTTGTAA TCTCAGTGAT TTCAACTCTC
TTAGTGCCTG CATTTGCTGA TTCATTCAGC TATGAAAAAG AAGCAGAAAT TTTGTATAGG
CTCGGCTTAT ACAAAGGAAC ATCAGAAACA GAGTATGTTC CAAACTTGGA AGGTAAACTT
GACAGACAGA CCGGAGTAGT TATGCTCCTC AGACTGTTCG GTCAGGAAGA CGATGCATTG
GAAATTCCAA TGGATGAGGC AGCTCAGACA CTTGCTGCTA AATTCAAAGA TGCAGCTGAC
ATTGCAGACT GGGCACAAAG ACAAGTGGCT TATGCAGTTG AAAAGGGATA TGTAAAAGGT
TATCCGGACG GAACATTCCT TCCGAACGCA GACCTCAACG GCTTGGCTTT CTGCTCATTG
ATTCTTCAGC AGTTGGGATA TGACGGAGAC TTTGTTTTCG ATGAAGCTGC GTACAAGTTG
CAAGAGTTTG GCGGCTTGAC TGCAGAACAA GCTGAAGCGT TCAACAACAA GAACGGAATC
AACAGAGACT CAATGGTTGG TATTGCTTTC TCAGCTTTGC AGGCTGTATA CAAAGCTACA
GGAAAGACAG TTATTGAGGT TCTCGTAGAG AACGGAAATG TTTCCAAAGA ACTTGCTATA
GAACTCGGTG TTCTTTTGAA AGCCATCAAG GAAGTAAAAG CTTTGGATGC TGTTAAGGTT
CAGGTTGGAA AAGAACCTGT ACTTCCTGAA GAAGTAGAAG TAGTATATGA AGATGACACA
ACTGAAAAAC TTGCAGTTGA ATGGCCTACA GTTGATACTT CAGAAGTTGG TGAACAGGAA
ATCGAAGGTA CTATCAAAGG TGCCAGCGGT TTGGCTTACA GAGAACCAAA GGCTACTCTC
AAGGTTATAG TAACACCTGA AGAACTCCAA GTTGTAGATG TTAAGGCTCC TAACCTTAAG
GAAATTGTAA TTGAATTCAA CGGAGAAGTA GCTTCAAAAG CTGATGAAAA ATCCAGCTAC
TCAGTTGAAG ACAATACTAT TGAATTGGTT ACAGTATCAG AAGACAAGAC TACAGTTACA
TTGACAGTTG CTGGTGCTAT GACAGCTGAA GAAGAAATCG AAGTAACAAT TAAAACAGCA
ACTGGCTTGA AGGAAGAAGT TACTAAGACT GTAGTACCTG CTGACTACGA AAATCCGGAA
GCTGAATCCA TTGCTTTGAT AGGTCCGAAC TCCTTTGAAA TTAAATTCTC AGAACCTGTT
CAGAGCAGCT CAGATGCAGA AGTTCTCGTT AATGACGGAA CTTATTATGT AAGTGAAGAA
AAACTGTCAC AGGACTACAG AACATTAACT GTAGAACTGG GCGTAAGTTC ATTGAATGAA
GGAACTTACA AAGTAAAAGT TAAAGGTTAC AGAGACTATG CTGGAAACAT AATGAGAACA
AAGACCTTTG ACTTGGAGTA TGTAAAAGAT ACAACTCCTC CAACTGCTAA AGTAAAAGAA
GCAACACAGA ACAAAGTAGT AATTGAATTC AATGAGCCTG CTACAAGAGA TGGTTACTCT
GGTGATGAAG CAGCTCTTAC AAGAGATTAC TTCTATCAGA CATATTCTTC CTGGAAGCCA
ACTAAAGTTG TAGCTTCAGA CAATAACAAA GTTTATACTT TGTACTTCTC TGAAGACCAG
AACGATGGTG GCTATCCTGT ATATCTGCTT CCGGTAGGAA ACGTTACTAT AACAATCCTC
AAGGAAGTAG ATGATGACGC TGTAGTAGAT GCATGGGGCA ACAAGCTCGA GTCCGATCTT
AAACTTACTG CTACAGTAGC AGCCGATAAT GAGGCTCCAA CAGTAAAAAG TGTAACAGCT
GAAGCAGAAG ATAAAATCGT GGTTGTATTC AGCGAAGATG TAAACGAGAA CCAGGCAAAA
GATAAGGACA ACTATGTAAT TAAGAAAGAC GGAAAAGAAA TAGACACAGC TATTTCAAGC
ATCACATATG ACAGCAATGA AACAAAGGTA ACAATTGTTT TGGATGAAAA GCTTAGTGGT
GGAAAATATA CAATAGATAT TAAGGGTATT AAAGATACTT CAGTATCTGA AAACGAAATG
AAAGCAGTTA CTATTGAATT TGAAGTAACT GACAAGACAG CTCCGACAAT TGAAGAAGTA
ACATTTGTTG ACAACTACAT CTATGTAAGA TACAGCGAAG CTATGTCAAC AAAGGGCAAC
GGTTCAGTAC TGAACAAGGA CAACTACAAA CTCGTAGATG ACAACGATAA GAAAGTAGAA
ATTAAGAAAA TTGAATTGTT TGGCTCTGAC AAGAACAAAG TAAGAATAAC TGTTGATAGT
GATGTAGATC TTAACGTAGA TTACGAACTC ACAATTGCTA ACGTTGAGGA TGAAGCTGGT
AATGCTATAA GTGCATTCGA TGTTAAGGCA AAGAAATTGA GTGAAGAGCA AGCACCAGAA
GTATCAGAAA TTAGAATTAT CAGCAAGACT GAAATTGAAA TAGTAATTAA CAAGATCCTT
GACAAGGCAA CTGTTGAAAA GACTGACTTT GAAGTAGAAA GAGGCAGCAA CAAAGTTGCA
CTCACAAGAA TAAGCTCAAT CACCTATGAT GATGGTAAAA CAATAGTTAA GGGTGTACTC
CCGGATGCAG TACGTCCTGC TAACTCCGGA GACATCACAG GTTATACGCT CTACATTGTG
GGTGAAATTA AATCCGATAC AGGTAAGGAA ATGGCAACAG GAGCAGTTTC GAAGCCAGTT
GATGATAAGT TTGCACCAAG CTTTGTAAGC GTAGCTAATG GTGTATACGG CGATGCATCA
AAGAAAGGAT TCACATTGAC ATTCGATGAA GACATCAAGT TCTTGAACAA CTCAGCTGGT
TTGGGTGCAA CCGACCTCGT AATCAAGAAC GGTAGCAAGA CTCTTGAAGC TGGTATCGAC
TATGATGTAG CAGCTATCGA TAACAAGATA ACAGTTACAC TCAAAGGTGA CGACTATGCT
GACTTCACAG GAACTCTTAA AGTTTCAACT AAGGATACTG TGAAGTATAT CACAGACGAG
GCTGGTAATG CACTCAACAA GTTCGAAAAT AAAGAGGTAA AGGTTCAATA A
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| Protein sequence | MKNLKKVLAV LVVISVISTL LVPAFADSFS YEKEAEILYR LGLYKGTSET EYVPNLEGKL
DRQTGVVMLL RLFGQEDDAL EIPMDEAAQT LAAKFKDAAD IADWAQRQVA YAVEKGYVKG
YPDGTFLPNA DLNGLAFCSL ILQQLGYDGD FVFDEAAYKL QEFGGLTAEQ AEAFNNKNGI
NRDSMVGIAF SALQAVYKAT GKTVIEVLVE NGNVSKELAI ELGVLLKAIK EVKALDAVKV
QVGKEPVLPE EVEVVYEDDT TEKLAVEWPT VDTSEVGEQE IEGTIKGASG LAYREPKATL
KVIVTPEELQ VVDVKAPNLK EIVIEFNGEV ASKADEKSSY SVEDNTIELV TVSEDKTTVT
LTVAGAMTAE EEIEVTIKTA TGLKEEVTKT VVPADYENPE AESIALIGPN SFEIKFSEPV
QSSSDAEVLV NDGTYYVSEE KLSQDYRTLT VELGVSSLNE GTYKVKVKGY RDYAGNIMRT
KTFDLEYVKD TTPPTAKVKE ATQNKVVIEF NEPATRDGYS GDEAALTRDY FYQTYSSWKP
TKVVASDNNK VYTLYFSEDQ NDGGYPVYLL PVGNVTITIL KEVDDDAVVD AWGNKLESDL
KLTATVAADN EAPTVKSVTA EAEDKIVVVF SEDVNENQAK DKDNYVIKKD GKEIDTAISS
ITYDSNETKV TIVLDEKLSG GKYTIDIKGI KDTSVSENEM KAVTIEFEVT DKTAPTIEEV
TFVDNYIYVR YSEAMSTKGN GSVLNKDNYK LVDDNDKKVE IKKIELFGSD KNKVRITVDS
DVDLNVDYEL TIANVEDEAG NAISAFDVKA KKLSEEQAPE VSEIRIISKT EIEIVINKIL
DKATVEKTDF EVERGSNKVA LTRISSITYD DGKTIVKGVL PDAVRPANSG DITGYTLYIV
GEIKSDTGKE MATGAVSKPV DDKFAPSFVS VANGVYGDAS KKGFTLTFDE DIKFLNNSAG
LGATDLVIKN GSKTLEAGID YDVAAIDNKI TVTLKGDDYA DFTGTLKVST KDTVKYITDE
AGNALNKFEN KEVKVQ
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