| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2346 |
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| Symbol | |
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| ID | 4808980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2795812 |
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| End bp | 2798841 |
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| Gene Length | 3030 bp |
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| Protein Length | 1009 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640107753 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001038741 |
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| Protein GI | 125974831 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0470801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAGAA GCAATAAAAA TTCGAATAAA GGGAAAGCAA AAAAGGCAGT AAAATCTATA
AAAGAAGAAA ACAAGTACGG TAAATTTAGA ATGTTAATAT TAATATTAAA TCTAATTGTA
ATATTTTATT CACCTTTTGT AAGAGGGCTG TATTTTGAAG CAGAACAGCT GCCGGCAGAA
ATATTTGTAT TAGTAAGCTT TGCTGTATTC TGGATATTTA AGTATATGGA GAAAGAAAAA
AAATTCATAT CGACTCCGAT AGAGTACTGT TCATTTGGGT TGATGATTGC TTATTTTATA
TCGATACTTG GTTCTGTCAG CACAAGGCTT GCAATTTCAG AATGGCTGAA ATATTGTATG
TATTTTGCTG TGTTTTTCAT GATTACCGAT TTGGCTTCAA CAATGAAAGA CAAGCTTATA
GTATTATGGA CTGTTATTGC AGCATCAGTG GGTTTATGTG TTGTTGGCCT TGACAGTGCA
TCTGGAGGTA AACTTGTTGA TTGGCTGAAT AATGTGTTTG ATTTCCTGCA TATACCGGTT
GAATTTTTTG GTCTTTACGT TGAAGGACGT ATTCATTCGA CGATCCAATA TCCCAATGCA
CTGGCTGCGT ATCTTATGGC AGTATTCTTT GTAACTTTGA CGATATCCAT AATATCGTCA
AAAATTTGGC AAAGACTGAT TGCAGGAGTA TGCAGCTTTG TATTTGTAAC GACGATAATA
CTTACTTTGA GTCGTGGTGT TATGATATTA ATACCCATTG TGCTGATATT ATATCTTGTT
GTAATTCCTG AGGGCAGTAA GCTGAGAGCT TTTTTAATGG CTTTATGTGC TGCAGTTTCA
AGTGTAATAC CTGTGCTGTT TTCACCTTTG GCAGGCAGAA GCCGCTCGAA CCTTTGGCTG
GGAATTGCAT TGGGAATAAT AGTTTCCTTG ATTTTAACAG TGGCAGTGGA GTTTTTATTT
AGGCTCCGTT TAAAAGTAAT GCCAAGGCTA AAGCTAAAGC CTTATTTCTT GTTCATCCCT
GCTGCTTTGG TATTGGCCGG AATATTGATT GTTATAAGTA TCCCGAAAGA GCTGGAGCTT
GAAATCTATA ATCCCGAAAG GGGAACGAAG TATTCTTTTC AGAAGAGTAT TGCATTGAAG
CCGGGTAAAG AGTATAAGCT GTTACTTGAT GTGTCATATA TGAATAATGA TGGTGAAAAT
TCATTAACAG TATTGATTGG CAGCCGGGAT AAAAAGAATA TAATGTTCGG AGGAAACACA
AAACTTGCAG AGATTAACGA AAAGAACAGT GATACTCTGG AAATTCCGTT TACAGTGCCA
CAGGGCGGTT CATTGGTAGA TATTAGAATT ACCAATAACT CAGAGAAGTC AAAGGTATTA
ATTGATAATG CTAAAATTAT TGATGGCAAA ACCGGGAAAA GTGTAAAAAA TGTTAAACTT
CAATACAAAT TTATACCGAA TTCCGTAGCC TCAAGATTTG AAAATCTGAT GATATCAAGA
AGTTTTATTC AAAGACAGAT ATATTTAAAT GACGGATTTC AGATGTTCAA AGATAATTGG
CTGATTGGAG CCGGAGGAGG GGCATGGCCG AGCCTTGTTT TTGCATACCA GTCCTACCCG
TACTGGTCCA CGCAATCCCA TGCATATTTT CTGCAGGTTG CGGTAGAGAC AGGCATAATT
GGGTTGATAG TCCTGATAAT GCTGCTGTTA TCAATTGTTG TACAGTTTAT TACGGAATAT
AAATATAAAA AAGAAGAAGA TGTTAATTAC AGGATTTTGC AAGGGACACT GTTAACATCC
ATATTCGGAA TGTTTCTGCA TTCGTGCTTG GATTTTGATT TATCAATATC CTCAGTATTC
CTGCTGTTGT GGACATTAAT GGCATTGTTT AATTCTGGCT ACAGACACAA TAGGCCTGTT
GTAAAAGGAA ATGACGGCAC CGGTTCGAAG CCTGGTTTAT TTTACAGGCT AAACGAATTA
AAGCCGTTTA ATACCAACCC AATAGTAATG ACTGTTTTGT CCTTTGCAAT TATGATAATG
CCGGTATTAT TCGCGGCCGC TTCAAGTTTT GACCGCAAAT ACGAAAAATC CATGTCTGAA
GGCAACAGAG AAAATGCGCT GATATATATA AGAAGTGCGG AGTCATTAGA TACTTTTAAT
GCTGATTATA AAGTAAAATA TGCAAATTTG CTTTTATCCT CAGAAGGTCT TACGAAAGAA
GATTTTGAAA CTGCCAAAAA ATTGGTAAGT AGCGCGGAAA AAGCAGGCAA ATACAGCGCC
GAAACATTAC AGAATGCTGC CATACTATAT ATGAAGATGT CCATGTTTGA CAAAGGAATT
GAGCTTGTAG ACAGGGCTAT TGAGTTAAAG CCGTTTTATG AAGAAGGCTG GCAGCTTAAA
ATGAATATGC ACTACCAGCT TGCCCTTGCG TATTTAAAAA ATGATGAGCA TGAGAATGCC
AAGAAGCACC TCGATTTGGC ACTTAGTGTA ATCAGCAATG CGAAAGCAAA AAATGAAAGA
AATATGGATC CGTTTGCATT TAGTGAAAAG ACAATGGAGT ATCTGGAAAA AATGGTTTAT
ATGAAAGAAA ATTTCGACAA CCTGAATTTG GGACAGGTAG ATAAAGTTAA ATTCCAAAGC
ATAAATGAAA TGGATATAGA CTCCGACAAT ATACCTGATC AGTGGAACAT TGTCCAAAAA
GAAAGGGTGG AGTTAAGTAT CAGCGAGGGT AATATTTTAG TTAATAATAT AAATGACGAT
ACATTAGGCT CTTTTCAGAC CAGAAATATA AATTTTGAAG CCGGTAAGAA CTATAGGATT
GAATTAGCAC TCGACAATCA GGAAGACATT AATGTACTGT ATTTTGTTCC CGAATTGCAT
ACGAAATTTG TACAGCTTGA AAAAACAGGA GAAGGAAAAT ATTCGGCAAA TATTGAACTT
CCGTCAGATT ATAAAGCAGA GAATACTTTT ATTAGGTTCC GTTTTTCAAA GGATTCATCG
ATAAAAAGCT TGATTGTTAC TGAAATATAA
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| Protein sequence | MGRSNKNSNK GKAKKAVKSI KEENKYGKFR MLILILNLIV IFYSPFVRGL YFEAEQLPAE
IFVLVSFAVF WIFKYMEKEK KFISTPIEYC SFGLMIAYFI SILGSVSTRL AISEWLKYCM
YFAVFFMITD LASTMKDKLI VLWTVIAASV GLCVVGLDSA SGGKLVDWLN NVFDFLHIPV
EFFGLYVEGR IHSTIQYPNA LAAYLMAVFF VTLTISIISS KIWQRLIAGV CSFVFVTTII
LTLSRGVMIL IPIVLILYLV VIPEGSKLRA FLMALCAAVS SVIPVLFSPL AGRSRSNLWL
GIALGIIVSL ILTVAVEFLF RLRLKVMPRL KLKPYFLFIP AALVLAGILI VISIPKELEL
EIYNPERGTK YSFQKSIALK PGKEYKLLLD VSYMNNDGEN SLTVLIGSRD KKNIMFGGNT
KLAEINEKNS DTLEIPFTVP QGGSLVDIRI TNNSEKSKVL IDNAKIIDGK TGKSVKNVKL
QYKFIPNSVA SRFENLMISR SFIQRQIYLN DGFQMFKDNW LIGAGGGAWP SLVFAYQSYP
YWSTQSHAYF LQVAVETGII GLIVLIMLLL SIVVQFITEY KYKKEEDVNY RILQGTLLTS
IFGMFLHSCL DFDLSISSVF LLLWTLMALF NSGYRHNRPV VKGNDGTGSK PGLFYRLNEL
KPFNTNPIVM TVLSFAIMIM PVLFAAASSF DRKYEKSMSE GNRENALIYI RSAESLDTFN
ADYKVKYANL LLSSEGLTKE DFETAKKLVS SAEKAGKYSA ETLQNAAILY MKMSMFDKGI
ELVDRAIELK PFYEEGWQLK MNMHYQLALA YLKNDEHENA KKHLDLALSV ISNAKAKNER
NMDPFAFSEK TMEYLEKMVY MKENFDNLNL GQVDKVKFQS INEMDIDSDN IPDQWNIVQK
ERVELSISEG NILVNNINDD TLGSFQTRNI NFEAGKNYRI ELALDNQEDI NVLYFVPELH
TKFVQLEKTG EGKYSANIEL PSDYKAENTF IRFRFSKDSS IKSLIVTEI
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