Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2342 |
Symbol | |
ID | 4808976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2792403 |
End bp | 2793461 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640107749 |
Product | hypothetical protein |
Protein accession | YP_001038737 |
Protein GI | 125974827 |
COG category | [V] Defense mechanisms |
COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTTTTAT TGGTGAATAT AGATGACAAT GAAAAATGGG ATAATACAGT CAAAGGATTT GAAAATTTTG ATGTTTATTA TCTGTCAGGA TATGTAAAGG CTTTCCATGC CCATGGTGAC GGGGAGCCTA AACTGTTTTT TTATGAAGAT AGCAATATTA AAGCAATTAA TGTTTTTATG AAAAGAGATA TTGAAAAGGA TCAAAACTTT TCGGGGAAAA TACCACCCAA TACTTTTTAT GATGCAGCGA CACCATATGG ATACGGAGGT TTTTTAATTG AAGGAAATGT GACGGATGAA AGTTTAAGGA CTCTTGAAAA AGAGTATTCC GAACTTTGCC TCAATGAAGG CATTATCAGT GAATTTGTAC GTTTTCATCC GGTAATTAAC AACTCTGGGA CTGTTTCATC AATTTACGAT ATTTTGGAGC TTGGAAGAAC CGTAACAATA GAATTGGATT CACGGGAAAA AGTTTGGGAA GGCTTTGCCG GCAACAATCG CAATAAGGTT CGGAAAGCCA AAAAGTCCGG AGTCGAGATA TTTTGGGGAC GAAGCCCAAA GCTATTTGAC ACGTTTATAC CTATGTACAA CGAAACAATG GATAATGACG GTGCATCAGG CTACTATTAT TTTAAAAAAG ACTTTTACAA TAGTATACTT GAAGACTTGA AATATAATTC ATTGATATTT TATGCTGTTT TTGAAGATAG AATAATTTCA ATGTCAATTA TTTTGTTTGC AAATAAACAG ATGCATTATC ATCTGTCTGC TACTGACAGA GAGTACAGAA ATCTTGCACC TACCAACCTT TTGCTTTATG AAGCGGCATG CTGGGGAATT GAAAATGGAT ATAAGACATT CCATTTGGGT GGAGGTTTGG GCAGCAGGGA AGACAGCCTT TATCAATTTA AAAAAGGATT TAACAAGAAC TCAAGCACTT ATTTTTGTAT AGGAAAAAAA ATATTTGACA AAGAGAAATA TGATGAATTG ATAAAAATAA GAAAGCAAGA TCCATACTTT GATGAAAACA AGTTGTTTTT CCCTTTATAT AGGGGATAA
|
Protein sequence | MVLLVNIDDN EKWDNTVKGF ENFDVYYLSG YVKAFHAHGD GEPKLFFYED SNIKAINVFM KRDIEKDQNF SGKIPPNTFY DAATPYGYGG FLIEGNVTDE SLRTLEKEYS ELCLNEGIIS EFVRFHPVIN NSGTVSSIYD ILELGRTVTI ELDSREKVWE GFAGNNRNKV RKAKKSGVEI FWGRSPKLFD TFIPMYNETM DNDGASGYYY FKKDFYNSIL EDLKYNSLIF YAVFEDRIIS MSIILFANKQ MHYHLSATDR EYRNLAPTNL LLYEAACWGI ENGYKTFHLG GGLGSREDSL YQFKKGFNKN SSTYFCIGKK IFDKEKYDEL IKIRKQDPYF DENKLFFPLY RG
|
| |