Gene Cthe_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2232 
Symbol 
ID4809970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2659417 
End bp2660415 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content42% 
IMG OID640107638 
Productpolysaccharide biosynthesis protein CapD 
Protein accessionYP_001038627 
Protein GI125974717 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGG ATAAAAAGAT ATTGGTTATC GGAGGGACAG GCTCCATCGG ACAAGCTCTG 
ATTGAACGTA TTCTAACTGA AAATCCTGCC GTAATCAGAG TTTACAGCAG AGACGAGTAC 
AAGCAGTTTT TGCTTGCGGA AAAGTTCAGG GAAAACGCCA ATATCAGATA TCTTATAGGC 
GACGTAAGAG ATGAGGACAG ACTCGACAGG GCAATGAATG ATATCGATAT TGTGTTTAAT 
CTTGCGGCCT TAAAACACGT ACCTGCATGT GAGTACAACC CGTTTGAGGC TGTCAGGACC 
AATGTTATCG GAAGCCAGAA TGTTATAGCC TGTGCCATGG CAAACAAGGT GAAAAAAGTA 
ATTTATACGA GCAGTGACAA GGCTGTTTCT CCAACCAATA CCATGGGTGC AACAAAGCTT 
CTGGCAGAAA GACTCATGTC ATCATCCAAC TATTCAAGAG GAAACACGGG TACGGTGTTT 
GCTTCTGTCA GATTCGGAAA TGTAATGGGC ACAAGAGGTT CAGTGATTCC GCTTTTCAAG 
CAGCAGGTTT TGGAAAAGGG ATATATTACG GTGACCGAAC CGGAGATGAC GAGGTTTATG 
ATGTCCCTCT CGCAGGCGGT GGAACTTACA ATTAAGGCAT GCAGCATTGC AAGAGGCGGG 
GAAGTTTTTG TGCTGAAAAT GCCTGTAATC CGGTTAAAAG ACCTGGCAGA AGTGATTATT 
GAGGATATGT GTAAAAAGAA CAATATTGAT CCCGAAAAGA TAGAGATTAA AAAGATTGGA 
CTGAGACCCG GAGAAAAGAT GTACGAAGAA CTTATGTCGG AAGATGAATC GACAAAAGCC 
GTCGAACTGA ATGATATGTA TGTAATAATG CCACCTTTTG AAAATAGTTA CTATATAAAT 
GCCAGAAAGG CGGTTATAGG CAATTACAGT TCACAAAAAG AAAAAACCCT GACCAAGTCA 
CAAATAAGGG AACTGCTTGT CAGGGAAAAA TTAATTTGA
 
Protein sequence
MFKDKKILVI GGTGSIGQAL IERILTENPA VIRVYSRDEY KQFLLAEKFR ENANIRYLIG 
DVRDEDRLDR AMNDIDIVFN LAALKHVPAC EYNPFEAVRT NVIGSQNVIA CAMANKVKKV 
IYTSSDKAVS PTNTMGATKL LAERLMSSSN YSRGNTGTVF ASVRFGNVMG TRGSVIPLFK 
QQVLEKGYIT VTEPEMTRFM MSLSQAVELT IKACSIARGG EVFVLKMPVI RLKDLAEVII 
EDMCKKNNID PEKIEIKKIG LRPGEKMYEE LMSEDESTKA VELNDMYVIM PPFENSYYIN 
ARKAVIGNYS SQKEKTLTKS QIRELLVREK LI