| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2210 |
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| Symbol | |
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| ID | 4811075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2639093 |
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| End bp | 2639662 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640107616 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_001038605 |
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| Protein GI | 125974695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000117372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTTTA ATCTTAAATC ATATATGCAG AGAGTAGAAT ATGTTGAGGT AAAGGAGCGT
GGTAAAATGA AAGCACAGGG AAAAGCAATA AAATACGGTG ACAATGTGGA TACGGACGTA
ATCATACCGG CAAGGTATTT AAATACTTCA GATCCCAATG AGCTTGCGAA GCACTGTATG
GAAGACATTG ACACCGAATT TGTGTCAAAG GTTCAAAAGG GAGATATCAT TGTTGCAGGT
AAAAACTTCG GATGCGGCTC TTCCAGAGAG CATGCCCCTA TTGCCATCAA GGCGTCGGGA
ATATCCTGCG TTATTGCCGA AACCTTTGCA AGAATTTTCT ACAGAAATGC AATAAATATT
GGGCTTCCGA TTATTGAGTG CCCTGAAGCT GCCAAAGATA TATCCGACGG TGATATAGTA
AGCATTGATT TTGACACCGG AAAAATTGTG AATGTGACAA AAAACAAGGA ATATACGGGA
GTGCCTTTCC CTGAATTTAT GCAGGAAATA ATTGCTTCCG ACGGACTTAT CGGATATATT
AAAAAGCAGA TTGGAAACAA GGAGGCATAA
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| Protein sequence | MNFNLKSYMQ RVEYVEVKER GKMKAQGKAI KYGDNVDTDV IIPARYLNTS DPNELAKHCM
EDIDTEFVSK VQKGDIIVAG KNFGCGSSRE HAPIAIKASG ISCVIAETFA RIFYRNAINI
GLPIIECPEA AKDISDGDIV SIDFDTGKIV NVTKNKEYTG VPFPEFMQEI IASDGLIGYI
KKQIGNKEA
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