| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1821 |
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| Symbol | |
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| ID | 4809805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2154850 |
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| End bp | 2155998 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640107235 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001038235 |
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| Protein GI | 125974325 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGGA ATTTGCGTTA TTTAAAAGGC AGTATTTTTA AAGGCAGGAT ATCTGCAAAT
GACATTATTA TAACGTTATT ATTTGTTGTG TTGGCTTTAG CCCCGTTGTT TCTTTCGGAT
TTCAGGACCA ATCTTTTGGG AAAGTTTATT GCTTATGCCA TTCTGGCTTT AGGAATCGAT
CTCATATGGG GCTATACCGG AATATTAAGT TTGGGGCATG GAGTCTATTT TGGACTTGGT
GCGTATTGCA TGGCAATGTA CTTGAAACTT GAGGCGAGCA ACGGAAAACT TCCGGATTTT
ATGTCCTGGA GCGGGCAAAA TGTTTTGCCG TGGTTTTGGA AGCCCTTCGC TTACGCACCG
GTGGCAATTA TTCTTTCCGT ATTGGTGCCC GCAGTCCTTG CGTTAATAAT CGGGTATCTC
ACTTTCAAAA ACAGGATTAA AGGTGTTTAC TTTTCCATAC TGACGCAGGC CCTTTCCATA
ATATTCGTGG TATTGTTTGT GGGGCAGCAG GCTTATACGG GAGGAACCAA CGGTATAACC
AATTTCAAGA CCATCTTTGG TTTCCCGCTG TCCGGTTTCT CCACAAAGGT GACTCTTTAT
TATGTTGCAT TGGGATTTCT GATACTGGCC TTTCTGTTTT GCCGGTGGAT TGTGCAAAGC
CGGCTTGGAA AAGTGTTGAT TGCCATAAGG GACAGCGAAA ACCGGGCAAG ATTTTCAGGA
TACAATCCGG CAATATACAA AACCTTTGTT TACTGTATTT CTGCCGGACT GGCCGGATTG
GCAGGAGCTT TATTCGTTCC TCAGGTGGGA ATTATTTCAC CGGCAGAGAT GGGAATAGTC
CCGTCGGTGG AAATGGTTAT ATGGGTTGCA ATCGGAGGAA GAGGCACTTT AGTCGGATCT
GTCATCGGGG CTATACTGGT AAACTCTTTG AAGAGTATGG TAAGTGAGAG CTTTCCGGCA
GTCTGGTCCT ATTTTATAGG GATTTCCTTT ATTGCTGTGG TCATATTTAT GCCTTACGGT
CTGGCAGGGT TGTTAAATCA GATTAAAGGA AAAATATATG CTCAAAAAGC TCAAAAAAGT
GTAAAAAGGT ATTCTTCTGC CACTTTAAAT ATTCTTGAAG AATCAGGGTG TGATGAATAT
GTCGGATAG
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| Protein sequence | MERNLRYLKG SIFKGRISAN DIIITLLFVV LALAPLFLSD FRTNLLGKFI AYAILALGID
LIWGYTGILS LGHGVYFGLG AYCMAMYLKL EASNGKLPDF MSWSGQNVLP WFWKPFAYAP
VAIILSVLVP AVLALIIGYL TFKNRIKGVY FSILTQALSI IFVVLFVGQQ AYTGGTNGIT
NFKTIFGFPL SGFSTKVTLY YVALGFLILA FLFCRWIVQS RLGKVLIAIR DSENRARFSG
YNPAIYKTFV YCISAGLAGL AGALFVPQVG IISPAEMGIV PSVEMVIWVA IGGRGTLVGS
VIGAILVNSL KSMVSESFPA VWSYFIGISF IAVVIFMPYG LAGLLNQIKG KIYAQKAQKS
VKRYSSATLN ILEESGCDEY VG
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