Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1812 |
Symbol | |
ID | 4809796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2148082 |
End bp | 2148870 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640107226 |
Product | urease accessory protein UreD |
Protein accession | YP_001038226 |
Protein GI | 125974316 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0829] Urease accessory protein UreH |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAATA AATTCGGAAA AGAAAGCAGG CTGTACATAA GAGCAAAGGT TTCAGACGGA AAAACATGCC TTCAGGATTC GTATTTCACA GCACCTTTTA AAATAGCCAA ACCCTTTTAT GAAGGGCATG GCGGATTTAT GAATCTTATG GTTATGTCAG CTTCAGCGGG AGTTATGGAG GGTGACAATT ACAGGATTGA AGTGGAATTG GACAAAGGCG CAAGAGTGAA ACTGGAAGGC CAGTCCTACC AGAAGATTCA CCGGATGAAA AATGGAACGG CAGTGCAGTA CAACAGTTTT ACCCTTGCAG ACGGAGCGTT TTTGGATTAT GCTCCCAACC CCACCATACC TTTTGCCGAC TCAGCATTTT ATTCAAATAC AGAATGCAGG ATGGAAGAAG GCTCAGCCTT TATCTATTCG GAGATACTGG CCGCGGGCAG GGTTAAGAGC GGTGAAATTT TCCGGTTCAG GGAATATCAC AGCGGGATAA AGATTTATTA CGGCGGGGAA CTGATTTTTC TTGAAAATCA GTTCCTTTTT CCAAAAGTGC AGAATCTTGA AGGAATCGGA TTTTTTGAAG GTTTTACACA TCAGGCGTCA ATGGGTTTTT TTTGTAAGCA GATAAGCGAT GAACTTATTG ATAAACTTTG TGTAATGCTT ACGGCCATGG AGGATGTCCA GTTCGGATTG AGCAAAACAA AGAAGTATGG CTTTGTTGTT CGGATTCTCG GAAACAGCAG TGATAGGCTG GAAAGTATTC TAAAACTGAT TAGAAATATC CTCTATTAG
|
Protein sequence | MKNKFGKESR LYIRAKVSDG KTCLQDSYFT APFKIAKPFY EGHGGFMNLM VMSASAGVME GDNYRIEVEL DKGARVKLEG QSYQKIHRMK NGTAVQYNSF TLADGAFLDY APNPTIPFAD SAFYSNTECR MEEGSAFIYS EILAAGRVKS GEIFRFREYH SGIKIYYGGE LIFLENQFLF PKVQNLEGIG FFEGFTHQAS MGFFCKQISD ELIDKLCVML TAMEDVQFGL SKTKKYGFVV RILGNSSDRL ESILKLIRNI LY
|
| |