| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1590 |
|---|
| Symbol | |
|---|
| ID | 4809581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1920800 |
|---|
| End bp | 1923064 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640107008 |
|---|
| Product | peptidase M56, BlaR1 |
|---|
| Protein accession | YP_001038009 |
|---|
| Protein GI | 125974099 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGT TATTTGAACT GTTCCTGCAA AACAGCTTTA CCGGTATAAT TTTTATATTG
GTAATATTAA TAATAAGGCA GCTTACCAAA AACTTTTCAA AAAGATACGT TACTGTTCTT
TGGATTCTGC TGCTTGCAGA ACTGTTGTTT ACTCCGCTGG TCACAGGTCC GTTTCATACA
ATACGAAATG TCGCAATCCT TAATTTTAAT GATGGCGTCT ATGACAGCTC CGAAAGTTTA
GGGCAAAATC AAATAAACTA CAATAACTCT GATACATATA AACAAATAGA AGGAGTTAAT
TCAACCGGTA ACAGTAATTT AAGCCTTGCA CGCAAGATAC AGGAAAACAG GATTGATAAA
GACAATTTGA CTGAAAATAA TATCACATCT TCAAATAATG ACAGTTCCAT TCCCACAGAA
AAGCACAGAT TGGCAGAATA TTTATCCTTT GTATGGCTTT CGGGAATCAT AGTATTCACT
GTTTATTTCC TTATACAATA TATAAAATTG AGGCACATGC TAAAAGGGGC TATTAAAGTG
GATAATAACA TATGGGAAAC TTCAGCCTGT GACATTCCAT TTGTTATGCC CGGTATTCCT
TCTAAAATCT ACATTCCGGT CGGGCTTGAA GGACGCCAGC GTGAGGATAT TCTTACACAT
GAAAGGGAGC ATATCAGGCA TTTTGATCCG TGGATAAAAT GCCTGGCAAC CATTGCTTTG
ACTGTACACT GGTTCAATCC TTTTGTCTGG ATTGCATTCT CCCTGATGGG AAAAGATATA
GAAATGTATT GTGATGAACG TGTTTTAAGA GGAAAAGGAC TAAATGAAAA AAAGCAATAC
TCACAAACCA TACTGGATTT TTCAAAGAAA GCCAATGGGT TACCATTAGC AATAGGTTTT
GCAAAAAATA ATACTGAAAA CAGAATTAAG CATATACTCT GTTCCAAAAA GCCACACCGT
ATCATGAATA TTGTATTGGT TGCCGTAATA CTGGCCTGCG GAGTATTGTT TCTTACAGCG
GGAAAAAAGT ATGCTGAAAA TACATACAAC GAAAACAAGC TGAATGGAAC TCAAAGAGAA
AATAATATCA GTGATACAGA AAAAACCCCG GCATCTGGGA AAGAATCAGC ATCAGACAAT
AACGCAGCCG ATGATTCGAA GGCTGAAAAT GAAGCCGTAA CCGAAAATCA GAATAGTTAT
ACGGAAGAAG AGGAATTCTG GGATGAAAAA TTAATCGTCG GAACTACTTT TGAACCGGAT
CCGAATTTAA AGAAACGTAT ACTGGATGCA CCGGATTATG CCAGTGACTG GGGCAGTTTT
CATCCTGTAT TTGAGGGCAA TATGACCGAA AATATCAATT TAATCGGAAA AACGCAGCAC
TTTTTGTTGT ACGGTACCTC AAATACGGAA AGTATGATCG TAAAAACCCC GGACAACCGA
TATATCTCAG CAAAAGTACC ATATACCTCC CACTACATGT TCCAGCCCCT TGTAAATGAG
ATGGATTATG ATAGGGACGG CGAAAACGAA CTTGCAATTA TCATCTATGT TAAACATGGC
ACAGGCTGTT CAATAAAGAC ATTATTTATG GTCGATAAAG CAAACGACGG AAAATGGTAT
ATGTACCAAT TGCTTGAGAA TGAATATCTG CCTCAGCTTG AAGCCAAATT TGATACAGTG
TATACAGAAG ACAGCATTAA ACTATTACTT GACGGCAAAC ATGTCGGTCT GACGAAACCT
ATGGATAATG AATTCAGAAA CAGCAGTGTC AACTATAAAT TTCATGCCGG TATGCAGATT
CAAATCCATT TCGTTGAAGA CCGGATTGAA CTGAATGCAG ATCTCCTTGG ATATTCTGAT
ACCTTTTTTT CGGGAGAATT TACAGGGCAC AGAATAAATG CAGATATTGC CTATCTTGGT
GAGGGAAAAT GGGAACTGAA AAATTTCCGA TACAGAGATA TCAATATGGA CTTAGTGATT
GAGGATGCGC TGACCATGTA CTTTACCGGC CGAACCGAGG AATTGAACCA ATATTACATG
GCAGATGGAT TTCACCTGAA AGAGATCAGG AAAAAGAGCA ATGATGCATC TGTTCTCAAT
ATATCATATC CGGTTGATAA CATGGACAGC GGCAAAGTCG AAGCTCATGC AACAGTTCGC
CTGGACAGCA GCAGCTCTTT AATCAATGTA ACAGTTTCCA TGAAGCTGAC AGACTCATTA
AACGGTACAT GGAAAATTGT CGGAATTGAT GTTTCGGGGC TGTAG
|
|---|
| Protein sequence | MTKLFELFLQ NSFTGIIFIL VILIIRQLTK NFSKRYVTVL WILLLAELLF TPLVTGPFHT
IRNVAILNFN DGVYDSSESL GQNQINYNNS DTYKQIEGVN STGNSNLSLA RKIQENRIDK
DNLTENNITS SNNDSSIPTE KHRLAEYLSF VWLSGIIVFT VYFLIQYIKL RHMLKGAIKV
DNNIWETSAC DIPFVMPGIP SKIYIPVGLE GRQREDILTH EREHIRHFDP WIKCLATIAL
TVHWFNPFVW IAFSLMGKDI EMYCDERVLR GKGLNEKKQY SQTILDFSKK ANGLPLAIGF
AKNNTENRIK HILCSKKPHR IMNIVLVAVI LACGVLFLTA GKKYAENTYN ENKLNGTQRE
NNISDTEKTP ASGKESASDN NAADDSKAEN EAVTENQNSY TEEEEFWDEK LIVGTTFEPD
PNLKKRILDA PDYASDWGSF HPVFEGNMTE NINLIGKTQH FLLYGTSNTE SMIVKTPDNR
YISAKVPYTS HYMFQPLVNE MDYDRDGENE LAIIIYVKHG TGCSIKTLFM VDKANDGKWY
MYQLLENEYL PQLEAKFDTV YTEDSIKLLL DGKHVGLTKP MDNEFRNSSV NYKFHAGMQI
QIHFVEDRIE LNADLLGYSD TFFSGEFTGH RINADIAYLG EGKWELKNFR YRDINMDLVI
EDALTMYFTG RTEELNQYYM ADGFHLKEIR KKSNDASVLN ISYPVDNMDS GKVEAHATVR
LDSSSSLINV TVSMKLTDSL NGTWKIVGID VSGL
|
|---|
| |