| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1388 |
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| Symbol | |
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| ID | 4809049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1694714 |
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| End bp | 1695007 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640106812 |
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| Product | TrpR like protein, YerC/YecD |
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| Protein accession | YP_001037813 |
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| Protein GI | 125973903 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4496] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02531] TrpR-related protein YerC/YecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000780152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACTCAA AAATCAGGGA TGAATTGACG GATAAGCTTT TTGAGGCCAT CCTTCTCCTT
GACAATATAG AGGAGTGTTA TGATTTTTTT GAGGATATAT GCACTATTTC GGAAATAAAG
GCCATGGCCC AGAGGCTTGA AGTTGCAAGG ATGCTGAGAG AGGGCAAAAC GTATACTGAA
ATAAGTGAGA GAACCGGGGC AAGTACCGCA ACAATAAGCA GAATAAACCG CGCTTTAAAT
TACGGTGCTG ATGGTTATAA AAAGATTCTT GACAGGATGT ACAACAAAAA ATAA
|
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| Protein sequence | MNSKIRDELT DKLFEAILLL DNIEECYDFF EDICTISEIK AMAQRLEVAR MLREGKTYTE
ISERTGASTA TISRINRALN YGADGYKKIL DRMYNKK
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