Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1315 |
Symbol | gmk |
ID | 4809455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1598719 |
End bp | 1599330 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106739 |
Product | guanylate kinase |
Protein accession | YP_001037740 |
Protein GI | 125973830 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.559001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCGTG AAGGGCTGCT GGTTGTCGTA TCCGGTCCGT CAGGAGCCGG AAAGGGCACG CTTTTGAATT TGCTGAAGGA TTCCGGAGAC AACAACATAA GGTTTTCGGT TTCTGCCACC ACAAGAGCAC CGAGAGTGGG CGAGGTGGAT GGCGTAAACT ATTTTTTTAA GACCAAAGAA GAATTTATGC TTATGATTGA AAATGACGAG CTTTTTGAAT GGGTGGAGTA CTGTGACAAC TTTTACGGAA CTCCGAAGAA GTACATTGAG GATACCATAA AAGGTGGCTA TGACTGTTTG CTGGAAATCG AAGTGGAAGG AGCGGCAAAA GTAATGAAAG CCTATCCTGA ATGTGTTTCG GTTTTTATTT TGCCGCCTTC TTTTGAAGAG TTGAGAAGAA GAATTGAAAA AAGAGGCACT GAGGATGTTG AGGTGGTGAA TAAGCGCCTT GAGAGGGCAA AAAAAGAAAT TGCCTATGCT TCAAACTACG ATTACATCAT AGTTAACGAC AATCTTAAAG ATGCAGTGGA AGGTTTGCGC AGCATAATCA AGGCAGAAAA GCTGAAGCTC AAGCGAAACA GGGATGTGCT TTGTCAGTTT GAACACAACT GA
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Protein sequence | MYREGLLVVV SGPSGAGKGT LLNLLKDSGD NNIRFSVSAT TRAPRVGEVD GVNYFFKTKE EFMLMIENDE LFEWVEYCDN FYGTPKKYIE DTIKGGYDCL LEIEVEGAAK VMKAYPECVS VFILPPSFEE LRRRIEKRGT EDVEVVNKRL ERAKKEIAYA SNYDYIIVND NLKDAVEGLR SIIKAEKLKL KRNRDVLCQF EHN
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