| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1272 |
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| Symbol | |
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| ID | 4809777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1547995 |
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| End bp | 1548732 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640106695 |
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| Product | putative RNA polymerase sigma factor SigI |
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| Protein accession | YP_001037697 |
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| Protein GI | 125973787 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02895] RNA polymerase sigma-I factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTATTTG TTTCTGCTAT TATAGATTAT GCCGGTGAAA CAGCAACTCA CATTGTTGAA
AAAATCAAAA ACGGGGACAA GCATTTAAAA GAAAAGTTCA TTAAAGATTA TATCCCGTTT
ATATTAAATA TTGTTTCAAG CTTCTACTCT TCAAAAACAG GAGATCTAAA AAGCAGCGAT
GAATATAGTA TTGGCTTGAT GGCCTTTAAT GAGGCTATCG AAAAATTTGA TGTTAATAAA
AGCAAAAGTT TTCTCAAATT TGCAGAAATG GTTATAAAAA AGCGAATGAT AGACTATTTT
AGAAAAACAT CCTCAATCGG CAGAAAAGAA ATCCCTTTTT CCTATTTTAA CAGCAATAAC
GAAACTGAAT TTAGAAAAAA AATAAATAAC CTTGACATCG AAGAGGAATT TAACAGTTAT
GAATTTATTT GCGAATTAAG GGACTTTTCC AAAAAACTTG AAAGCTTTGG ACTTAGCATA
AACAATTTGC CTGATTACAT GCCCAAACAC AAAGACTCAA GAGAAATGTG CATAAACATA
GCCAAAAAAA TAGTTGAAAA CAAGAGTATT TTTGACAAAT TAAAGACAAA AAAGTACATA
CAGATGAAAG AGCTTTCCAA AATAATTGAT GTTCATCCAA AGACCGTTGA AAGAAACAGG
GCTTTTATCA TATGTTTATG TATATTATTT GATAATGATT ATGGAAACTT TAAATCGTAT
TTAAATAAAA TATTTTAA
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| Protein sequence | MLFVSAIIDY AGETATHIVE KIKNGDKHLK EKFIKDYIPF ILNIVSSFYS SKTGDLKSSD
EYSIGLMAFN EAIEKFDVNK SKSFLKFAEM VIKKRMIDYF RKTSSIGRKE IPFSYFNSNN
ETEFRKKINN LDIEEEFNSY EFICELRDFS KKLESFGLSI NNLPDYMPKH KDSREMCINI
AKKIVENKSI FDKLKTKKYI QMKELSKIID VHPKTVERNR AFIICLCILF DNDYGNFKSY
LNKIF
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