Gene Cthe_1205 details

Gene Information

• Locus tag: Cthe_1205
• ID: 4809897
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 1436762
• End bp: 1438690
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640106628
• Product: putative serine protein kinase, PrkA
• Protein accession: YP_001037630
• Protein GI: 125973720
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2766] Putative Ser protein kinase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAGAC TGGATTTTTC AAGTATCATA CGCAAGGACA GGGAAGAACA CAAGAGCAAA 
AAGTTTGAAG GAACTTTCCT TGAGTACCTT GAAATTGTGA AAGAAAACCC CGAGATTACG 
ATGCTTGCTC ACCAAAGAAT GTATAAGCTT ATCACGGAAC CCGGTGTGAC CGTAATAAGA 
ACCGAGGAAA ATCCCAGACT TCGCAGGATA TATGGAAATG ATATTATAAA GAAATATAAA 
TTTTTTGAGG ATGAATTTTT CGGAATAGAT AAGACAATCA TGAAAATCGT AAGGTATTTT 
CATTCGGCTG CCATGGCGGG AGAAGAAGCA AGACAGGTAC TTTACCTGGT GGGACCGGTC 
GGTGCGGGAA AATCATCATT GATGGAAGCT TTAAAACGCG CATTGGAAAT GAGTCCTCCG 
ATTTATGCAT TAAAGGGATG CCCAATGAGG GAGGAGCCTT TGCATCTTGT GCCAAAACAT 
TTGAGAAAAG AATTTGAAGA AATATTGAAT GTGAGGATAG AAGGAGACCT GTGCCCCATA 
TGCCGTTACA GACTTAAAAA CGAATATAAT GGGGAATATG AGAGATTTCC CGTTGAGACG 
GTGGATTTTT CCATCAGGTC AAGGAAAGGT ATCGGTGTGG TACCTCCCGT GGATCCCAAC 
AACCAGGACA CATCGGTTCT TATAGGCAGC GTGGACATAT CCAAGATAGA CTTGTATCCG 
GAAGATGACC CCAGAGTTCT TTCGCTGAAC GGTGCGTTCA ATGTCGGAAA CCGCGGTATT 
GTTGAGTTCA TTGAAGTGTT TAAAAATGAG ACCGAGTATT TGCACACAAT GATTACCGCA 
ACCCAGGAAA AGTCGATTCC GTCTCCCGGA AAAGGTTCAA TGATATACTT TGACGGTATA 
ATTCTGGCCC ATTCTAATGA GGCGGAATGG AACAAGTTCA AGTCCGATCA CACAAACGAA 
GCAATACTTG ACCGAATTGT AAAAATCGAA GTTCCGTATT GTCTGGAGCT TAACGAAGAG 
ATAAAAATTT ATGAAAAAAT ATTGAGAAAG AGCAAGTTCG ATGCCCACAT AGCACCTCAC 
ACCATTGAAA TTGCTGCAAT GTTTGCAATA CTGACAAGGC TTGCCCCGTC AAACAAGGTG 
GACCCCATGA CCAAGCTTAA GATATACAAC GGTGAGGAAA TAATTGAAAA GGGTATGACA 
AAGAAAGTTG ATATTTTTGA ACTTAAAGAA GAGGCTCCGA GGGAAGGAAT GACGGGTATT 
TCCACGAGAT TTATCATGAA AGTGCTGGAT ACGACGCTTT CAGAATCGGA ACACAACTGC 
ATCAACCCCA TATCTGTTAT GGAGACACTG GTTAAATCAA TAAAGGAGCT GTCAATCAGC 
GAGGAAGAAA GGGAAAGATA TTTAAGGTTT GTGCAGGACA GTATAAGAAA AGAATACAAC 
AAGATTTTGG AAAGAGAAAT TACAAAGGCG TTTATTCATG GCTACAAGGA ACAGGCGGAA 
AGCCTCTTTA ACAACTATCT TGACCATGCC GAGGCCTTTG TAAACAAGTC AAAGATAAAG 
GACAGGAATA CGGGAGAAGA GCTTGAGCCG GACGAAAAAT TCCTAAGATC CATAGAGGAG 
CAGATAGGAA TTACGGATAC TGCGGCAAAG GGATTTAGAG CGGATGTTAC GGCATATATG 
TTCTATGTTT TGAGAAACGG CGGAAAGCTT GACTATACCA GCTATGAGCC TTTGAAGGAA 
GCTATTGAAA AGAAACTTAC ATCATCGGTC AGAGAACTTA GCAGGGTTAT TACACAGGCA 
AAGGTAAGGG ACAAAGAGCA GAGCGAAAAA TACGATACAA TGGTTCAGGA GATGAAAAAT 
AACGGATACT GCGACCATTG CTGCAATGTT ATATTGAAAT ATGCGGCTAA CAACTTGTGG 
AAGGATTAA 

 

Protein sequence

MERLDFSSII RKDREEHKSK KFEGTFLEYL EIVKENPEIT MLAHQRMYKL ITEPGVTVIR 
TEENPRLRRI YGNDIIKKYK FFEDEFFGID KTIMKIVRYF HSAAMAGEEA RQVLYLVGPV 
GAGKSSLMEA LKRALEMSPP IYALKGCPMR EEPLHLVPKH LRKEFEEILN VRIEGDLCPI 
CRYRLKNEYN GEYERFPVET VDFSIRSRKG IGVVPPVDPN NQDTSVLIGS VDISKIDLYP 
EDDPRVLSLN GAFNVGNRGI VEFIEVFKNE TEYLHTMITA TQEKSIPSPG KGSMIYFDGI 
ILAHSNEAEW NKFKSDHTNE AILDRIVKIE VPYCLELNEE IKIYEKILRK SKFDAHIAPH 
TIEIAAMFAI LTRLAPSNKV DPMTKLKIYN GEEIIEKGMT KKVDIFELKE EAPREGMTGI 
STRFIMKVLD TTLSESEHNC INPISVMETL VKSIKELSIS EEERERYLRF VQDSIRKEYN 
KILEREITKA FIHGYKEQAE SLFNNYLDHA EAFVNKSKIK DRNTGEELEP DEKFLRSIEE 
QIGITDTAAK GFRADVTAYM FYVLRNGGKL DYTSYEPLKE AIEKKLTSSV RELSRVITQA 
KVRDKEQSEK YDTMVQEMKN NGYCDHCCNV ILKYAANNLW KD