| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1187 |
|---|
| Symbol | |
|---|
| ID | 4810139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1416370 |
|---|
| End bp | 1417224 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640106609 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037612 |
|---|
| Protein GI | 125973702 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4587] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGCT CGGAGCATAA ACCAAAAAGC ATTATACTTA AACAACTTAA CATTTTAAAA
GCTACCGCAC TGGCAACATA CAAGGATTGG GCGGCCTACA GAAGCCACCT GGCGGTATCC
ATTTTTGTAG GTCCTGTAAC TTTCCTTGTA CAGATATTCA TCTGGAACGC CGTTTATTCC
GCAGAAAACA GATTGGACAG CACTTTGTCA GGACTTACCT TGAATCAAAT GCTTGCATAT
TTTGGAATTG CCACGACTAT AAACTATTTG ATTTATGATA GCGCTGACTG GGACCTCCAA
ACGCTGATAC GAACGGGAAA CTTTATTACA TTCATGCTCC GCCCTGTTTC CCACTGTTAT
TTTGCGTTTT GCGAAAAAAT AGGTCACAGG CTTTTGGCTC TGTGGGTTGA ATTTATACCG
GTTTATCTTC TGTTTCTGTT TGTATTCAAA ATAAACCTCA TACCGGCCAA CTTGGTGTGG
ACGCTCATTT CCATAAGTTT AGGCTTTGTT CTGATGTTTT TGATAAATTA CTGCATAGGT
ATAACCGGAT TCTGGCTTAC AAAAACCGAA GGCCTAAGAA GGGCTTTCCT TGTACTTAGG
GACCTTTGCG CCGGTGCTCT GGTTCCCCTC ACGCTGTTTC CGGACTTTAT ACAAAAGATA
TTGTTTTTTC TTCCGTTTCA ATTTGTGGCC TACGTGCCTA CAAGGGTTTT CATCGGCTCA
TATGAACTGG CGGGAATAAG CCTTTCCGTA CCTTGTGTTG TCGGGATGCA GGCAGTGGCT
GTTGTAGTTA TGTTTTTGGT ATACAAGCTT CTGTGGTATC TCGGTATTAA AAAATTCACG
GGGGTGGGCG CATGA
|
|---|
| Protein sequence | MIGSEHKPKS IILKQLNILK ATALATYKDW AAYRSHLAVS IFVGPVTFLV QIFIWNAVYS
AENRLDSTLS GLTLNQMLAY FGIATTINYL IYDSADWDLQ TLIRTGNFIT FMLRPVSHCY
FAFCEKIGHR LLALWVEFIP VYLLFLFVFK INLIPANLVW TLISISLGFV LMFLINYCIG
ITGFWLTKTE GLRRAFLVLR DLCAGALVPL TLFPDFIQKI LFFLPFQFVA YVPTRVFIGS
YELAGISLSV PCVVGMQAVA VVVMFLVYKL LWYLGIKKFT GVGA
|
|---|
| |