| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1153 |
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| Symbol | |
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| ID | 4810821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1370898 |
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| End bp | 1371797 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640106575 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001037578 |
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| Protein GI | 125973668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00439515 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGAGT TTGTAAAAAC CGGCAAAACA GTATGCATAC TGATAAATAA GCAAGGCAGG
ATTTACTACA GTAATATCGG TAAGGATGTT GCTGAAAAGT GCCTGGAAGA TATTCATATC
TTTGACCATT TGCCTGCTGA CGGTACTGTT AGTTACAATG TTGGGTATTA CACTGTCACT
GCTGATACGG TTGATTTGGA TGAGGCACAC TACTATTTGA TTCTTATTCA ACCGCAGGGC
AATTTATATA AATATGCTTA CAGGGACTCA TTTACAGGCT TATACAACAG AAACTACTGG
GAGCAGTTGA TATCAGGTAA GATGCACCGC CCCATACCCA AGAGGTTTAC TTTAATTGTT
ATTGATGTGG ATAATCTGAA AAGCCTTAAC GACAACAGGG GGCATCTGGC AGGGGACAAG
GCTATACGGA TTGTCGGGAA GTCTATTAGA GAAAGTATCC GTAAACAGGA TATTGCTGTA
CGGTATGGGG GAGATGAGTT CTTTATTCTT CTTGCAAATA CGAAAAAGGC TATAGTAGAA
AAGGTGATAA ACAGGGTTAA GGAAAATATA AGAAAAAGAG GGAAAGAAGA AAATATTCAC
ATTGAAATAA GTGTAGGGAT GGCTTGCTCA AATTCTATTA ATAAACTGGA AAAGGTGATA
ACTATGGCAG ATTATAATAT GTATAAAGAA AAGAGGGAGA AGAAGGTCCA AGTGAAGCAT
ATAGGAGATG AATTAAAGGA TATAAAACAG AAAATAGAAT CGGTAAGGGA GAAATTGAAT
AGTAAAGTGC TTGATGAGAG AAATATGTCG ATTAACAAAG AACTGTTGGA ATTAAGCATA
AAAATGGATA AACTTATTTT CGAATATATA AATGAATTCA AGGAAAAACA TTCAAAATAG
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| Protein sequence | MEEFVKTGKT VCILINKQGR IYYSNIGKDV AEKCLEDIHI FDHLPADGTV SYNVGYYTVT
ADTVDLDEAH YYLILIQPQG NLYKYAYRDS FTGLYNRNYW EQLISGKMHR PIPKRFTLIV
IDVDNLKSLN DNRGHLAGDK AIRIVGKSIR ESIRKQDIAV RYGGDEFFIL LANTKKAIVE
KVINRVKENI RKRGKEENIH IEISVGMACS NSINKLEKVI TMADYNMYKE KREKKVQVKH
IGDELKDIKQ KIESVREKLN SKVLDERNMS INKELLELSI KMDKLIFEYI NEFKEKHSK
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