Gene Cthe_0925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0925 
Symbol 
ID4811218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1111226 
End bp1111873 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content41% 
IMG OID640106344 
Producthypothetical protein 
Protein accessionYP_001037352 
Protein GI125973442 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.816716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGG AAAAGCTGGT GCAGATTCTA TGGGATTATC TTCGCATGAA CCATAAGCTT 
GAAAAATCCG ATTGTATAGT TGTCCTGGGA AGCCATGACA CAAGAGTTGC AAAGAGGGGA 
GCAGAAATCT TTTTGGAGGG TTTTGCTCCT CTGATTGTCT TTTCAGGAGG ATATGGCAAG 
CTTACAAAAC ATATATGGAA CACCACGGAG GCTGAAAAGT TTGCCCGGAT AGCGATGGAT 
ATGGGAGTTC CGGAGACAAG TATTTTGATT GAGGACAAAT CTTCAAACAC AGGCGAAAAT 
ATTTTATTTG TAAAAGATTT AATAAATAAT AAGAAAATAA AAGTTCAAAA AATTATTGCG 
GTCAACAAGA CTTATATGGA AAGAAGGACC TATGCCGCAT TTAAAAAGCT CTGGGAAGAT 
ATAGACGTGA TTGTTACCTC TCCCCAGATG GAGCTTACGG AGTATCTTGC GGGTTACCGG 
AGCGGGGAGA TTACGGAGGA TGAAGTGATA AATGTAATGG TAGGCGACCT TCAGAGAATA 
AAGATGTATC CCGAAAAAGG CTTCCAGGTG CATCAGGATA TTCCTAAAGA GGTTTGGGAT 
GCATACTTGA AGCTTGTTGA GATGGGATAC ACTAAGCACC TGTGCTAA
 
Protein sequence
MEKEKLVQIL WDYLRMNHKL EKSDCIVVLG SHDTRVAKRG AEIFLEGFAP LIVFSGGYGK 
LTKHIWNTTE AEKFARIAMD MGVPETSILI EDKSSNTGEN ILFVKDLINN KKIKVQKIIA 
VNKTYMERRT YAAFKKLWED IDVIVTSPQM ELTEYLAGYR SGEITEDEVI NVMVGDLQRI 
KMYPEKGFQV HQDIPKEVWD AYLKLVEMGY TKHLC