Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0882 |
Symbol | |
ID | 4810500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1058453 |
End bp | 1059343 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106298 |
Product | hypothetical protein |
Protein accession | YP_001037309 |
Protein GI | 125973399 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000008536 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGGAAAT TCAATTTTGG CTATCTTTTT ATTCTGGTTA CCGTTGTTTT TTTTAGTACA TATGAGGTGG TAAGCAAAAC AATTATTGGT AAAGTAGACC CTTTTCAAAT CAACTTTCTG AGATTTTTCA TCGGCGGCTC TCTGCTATTT TTATTCTTAT TGATAAAGCG TGACGTGAAA ATTGATAGAA AAAGCCTGAT GATTGTCTCG GCAGCGGGAA TCCTTAATGT AGTGTTCAGT ATGAATCTTC TTCAGCTGAG TTTAAACGTT GCTTATGCTA AAGCAGCCGT AGTGGCGGTT ATTTTCAGCA GTAATCCGAT ATTTGTTTCT ATCTTTGCAG CCGTTATGGA CAAGGAAAAA ATAACTTTGT TTAAAGCTGC GGGTATGTTT TTGGGAATGC TGGGTATAGC GGTTATAAGT ATCAATGGAC AAGCCTTTAG GGATATAAAT ATATTAAGTC CCCTTCTTGC GTTGATGTCG GCAGGTTTAT ATGGGTTGTA TACTGTCGTG GGCAGAAGGG CATCTTCAAA AATCGGAAGC ATTAAAATGA ATGCATATTC CTTTTTAATC GGTAGTCTAA TTTTGCTTTC TGTTTTATTG ATAAAAGGTC TTCCGGCTTT CAAATTTGAC TGTTCAGCAT GGCCTCAGGT GGTATATCTC TCGGTCTTTG TCACCGGTAT TGCTTATCTT ATTTATTTTA TGGGCTTGGT TCGTACCGGC GCCGGCAGCG GTTCTGTGGT TTTCTTTTTA AAGCCTGTTT TGGCAAGTGT GTTTGCAATT GTTTTTCTTG GTGAAAAAAT CACTTTGAAT CTTATATTTG GTACTTTCCT TATTCTTTTG GGAATGGCAG TGATGTTTTA TTGGGAGAAA ATCAGGCAGA GGTTTGTATA G
|
Protein sequence | MRKFNFGYLF ILVTVVFFST YEVVSKTIIG KVDPFQINFL RFFIGGSLLF LFLLIKRDVK IDRKSLMIVS AAGILNVVFS MNLLQLSLNV AYAKAAVVAV IFSSNPIFVS IFAAVMDKEK ITLFKAAGMF LGMLGIAVIS INGQAFRDIN ILSPLLALMS AGLYGLYTVV GRRASSKIGS IKMNAYSFLI GSLILLSVLL IKGLPAFKFD CSAWPQVVYL SVFVTGIAYL IYFMGLVRTG AGSGSVVFFL KPVLASVFAI VFLGEKITLN LIFGTFLILL GMAVMFYWEK IRQRFV
|
| |