Gene Cthe_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0863 
Symbol 
ID4810481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1037851 
End bp1039968 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content45% 
IMG OID640106279 
ProductL-glutamine synthetase 
Protein accessionYP_001037290 
Protein GI125973380 
COG category[R] General function prediction only 
COG ID[COG3968] Uncharacterized protein related to glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAATG ACGAATTACA GACCTATTCA TTAACAGAGG TTTTTGGTGC GAATGTGTTT 
AATGACGCCG CAATGAGAGA ACGCCTTCCC AAACCGGCTT ACAAAGCATT AAAGAAGACT
ATAGATGAAG GAACTCCATT GGACCGGGAT ATAGCAGAAA TAGTTGCAAA CGCTATGAAA
GACTGGGCAA TCGACAAGGG GGCAACTCAT TACACCCACT GGTTCCAGCC CATGACCGGA
ATCACGGCTG AAAAGCACGA TTCCTTTATT TCACCGACAT CGGACGGAAA AGTTATAATG
GAATTCTCTG GAAAAGAACT GATAAAGGGA GAGTCCGACG CTTCATCTTT CCCTTCCGGA
GGTTTGAGAG CAACTTTCGA GGCAAGAGGA TATACGGCAT GGGACTGTAC ATCTCCGGCT
TTTGTGAAAG ACAACACCCT TTATATCCCG ACAGTTTTCT GCTCATACAA CGGCGAGGTT
TTGGACAAAA AAACCCCTCT GCTTCGCTCT ATGGAGGCAC TGTCAAAGCA AGCCCTTCGC
ATACTCAGAC TTCTTGGAAA CACGACCGTG AAAAAAGTAA TTACCACGGT AGGTGCCGAA
CAGGAATATT TTCTGATTGA CAAAAAACTT CACGATCAAC GCAAAGACCT CATCTACACC
GGTCGTACAC TTTTTGGAGC AATGCCTCCA AAAGGACAGG AAATGGACGA TCATTATTAT
GGCGCTTTCA AGGAAAGAAT ATCTGCTTTT ATGAAAGAAC TGGACCGGGA GCTTTGGAAA
CTTGGCGTTT CAGCAAAAAC AAAACACAAT GAGGTCGCAC CCGCACAGCA CGAGCTTGCT
CCAATTTTCA ACACGGCCAA CATTGCCACC GACCACAACC AGTTGATAAT GGACACTCTT
AAAAAAGTTG CGCAAAGGCA CGGTCTTGTT TGTCTGCTTC ACGAAAAACC TTTCGCAGGC
CTTAATGGTT CCGGAAAACA CAACAACTGG TCTCTGAGTA CCGACGACGG TCAAAACCTC
CTGGATCCGG GCCGTACACC TCATGAAAAT GCACAGTTTC TCATATTCCT GTGTGCGGTA
ATAAAGGCCG TGGATGAATA TGCGGACCTT CTCAGATGCG CTGCTGCAAA TGCCGGCAAC
GACCACCGTC TTGGAGCTCA TGAAGCACCT CCGGCAATAA TATCAATATT CCTTGGTGAA
CAGCTTACGG ATATTCTTGA ACAAATCGAG AATAACGGAG GAGCAAAATC ATTAAAGCAG
GCCGCACCGC TGAAAATCGG TGTAACCACG CTTCCTGTCC TGCCTAAGGA CGCCACCGAC
AGAAACAGAA CTTCTCCTTT TGCATTTACA GGAAACAAGT TTGAGTTCAG AATGGTTCCT
TCGTCAGCTT CAATCGCCGG CCCAATTTTT GTACTTAACA CCATAGTTGC CGAGGAGCTC
TGCCAAATTG CAGACAGGCT TGAGAAAGCT GAAGACCTCA ATGCGGAAAT TCACGCAGTT
CTCAGGGAAA TAGTAAAAAA CCACAAAAGA ATAATATTCA ACGGAAACAA TTATTCCGAA
GAATGGATTG AAGAAGCCAA AAGAAGAGGT CTTCCCAATA TACGCTCAAC CGTTGAGGCA
ATAAAGGCAC TGATAGATGA AAAAAACATC CGCGTATTCG AAAAACACAA GGTTTTAAAC
AGAACAGAGC TGTATTCCAG GTATGAAATA CTTCTTGAAA GCTATATTAA GACAATCAAC
ATCGAAGCAC TAACAATGAT AGAAATGACA AAGCGGGATA TTATACCTGC TGTTATCGGC
TATATTACAA AACTTGCCGA CTCAATAAAC ACTGTCAAAG CAACAGGTGT CAATGCCGAC
ACCAGTGTTC AGGCAGAGCT TTTGCAGGAA GTGTCCTCAC TTCTTGCCGA ACTTAAAAAG
AACTTGGCCG CTCTTGAAAA ATCGACTTCA GAGGCAGCAG ATTTCAGCGG TGACACATAC
AAAAAAGCAT GTATGTACAG GGATGATGTG TTCGTCAGAA TGAATGAACT CAGAGCCGTG
GCTGACAAAC TCGAAACACT GGTTGATTCA AAAATGTGGC CGTTCCCGAC ATACGGCGAC
CTTCTCTTTA ACGTGTAA
 
Protein sequence
MVNDELQTYS LTEVFGANVF NDAAMRERLP KPAYKALKKT IDEGTPLDRD IAEIVANAMK 
DWAIDKGATH YTHWFQPMTG ITAEKHDSFI SPTSDGKVIM EFSGKELIKG ESDASSFPSG
GLRATFEARG YTAWDCTSPA FVKDNTLYIP TVFCSYNGEV LDKKTPLLRS MEALSKQALR
ILRLLGNTTV KKVITTVGAE QEYFLIDKKL HDQRKDLIYT GRTLFGAMPP KGQEMDDHYY
GAFKERISAF MKELDRELWK LGVSAKTKHN EVAPAQHELA PIFNTANIAT DHNQLIMDTL
KKVAQRHGLV CLLHEKPFAG LNGSGKHNNW SLSTDDGQNL LDPGRTPHEN AQFLIFLCAV
IKAVDEYADL LRCAAANAGN DHRLGAHEAP PAIISIFLGE QLTDILEQIE NNGGAKSLKQ
AAPLKIGVTT LPVLPKDATD RNRTSPFAFT GNKFEFRMVP SSASIAGPIF VLNTIVAEEL
CQIADRLEKA EDLNAEIHAV LREIVKNHKR IIFNGNNYSE EWIEEAKRRG LPNIRSTVEA
IKALIDEKNI RVFEKHKVLN RTELYSRYEI LLESYIKTIN IEALTMIEMT KRDIIPAVIG
YITKLADSIN TVKATGVNAD TSVQAELLQE VSSLLAELKK NLAALEKSTS EAADFSGDTY
KKACMYRDDV FVRMNELRAV ADKLETLVDS KMWPFPTYGD LLFNV