Gene Cthe_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0717 
Symbol 
ID4810335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp872583 
End bp873365 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content35% 
IMG OID640106134 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_001037145 
Protein GI125973235 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00142456 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATGG ATTACGAAGG CTTTAAGAAA GAAATATTCA AGCTGACCGG AATTGACCTT 
GGCTCTTACA AAGAAAAACA AATGAAAAGA CGGCTTGACT CCCTGATAAG CAAAAATAAT
TTCAGCGGCT ATAAAACATA CATTGAAGCT CTTAAAACAG ATAAAAAACT TTTCAATGAA
TTTATCAACT ATATGACCAT CAATGTATCA GAGTTCTACA GAAATCCGGA ACAGTGGGAA
AAACTAAAAA ATATCATACT TCCGTCACTT CTCGAAAAAA ATAGCAATCC GAAAATCTGG
AGTGCCGCCT GTTCGAGCGG AGATGAGCCT TATACTCTTG TTATGATACT GAACGAATTT
TTACCGCTTA ACAAAATAAA AATTATCGCC ACCGACATAG ACGCCGAAAT CCTTGTAAAA
GCAAAAAACG GGCTTTACAC TGAGAAAAGC ATTGCCAATC TGCCAAAAAA ATATGTTGAG
AAATATTTTA AAGTAGACGG CGATGTATAT GCCATAAACC AGGAAGTAAA AAATTGTGTC
GAATTTAGTA AACACAATCT GTTGGCAGAC CCTTATCCAA AAAACTGCGA CCTTATCGTA
TGCAGAAATG TACTTATTTA TTTTACCGAG GAAGCAAAGG CGGAAATTTA TAAAAAATTC
AACAGAGCCT TAAAAACCGG TGGTGTGCTT TTTGTCGGAA GCACAGAACA GATAATACTT
TATAATCTTT ATAATTTCAA GCCCATACAA ACGTTCTTTT ATCAAAAGGA AAAAGATATT
TAG
 
Protein sequence
MVMDYEGFKK EIFKLTGIDL GSYKEKQMKR RLDSLISKNN FSGYKTYIEA LKTDKKLFNE 
FINYMTINVS EFYRNPEQWE KLKNIILPSL LEKNSNPKIW SAACSSGDEP YTLVMILNEF
LPLNKIKIIA TDIDAEILVK AKNGLYTEKS IANLPKKYVE KYFKVDGDVY AINQEVKNCV
EFSKHNLLAD PYPKNCDLIV CRNVLIYFTE EAKAEIYKKF NRALKTGGVL FVGSTEQIIL
YNLYNFKPIQ TFFYQKEKDI