| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0706 |
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| Symbol | |
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| ID | 4810324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 863285 |
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| End bp | 864184 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106123 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001037134 |
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| Protein GI | 125973224 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGG ATAAAGAGCA GGATTTGTTG AAAAGAATTC AAGCCGGTAT GCCGGGTTTT
AGCAAAGGTC AGAAGCTTAT AGCAAATTTC ATTATAAATC ATTACGACAA AGCAGCTTAC
ATGACTGCGG CCAAACTGGG AGAAGAAGTG GGAGTAAGCG AGTCAACGGT TGTAAGGTTT
GCCAACGAAA TAGGATTTGA CGGTTATCCA AAACTACAAA AAGTTTTAAG AGAAATGAAT
AAGAGCAAGC TTACTGCCGT TCAGCGTATT GAAGTAACTT CCAGTAGAAT TAACGAGGGA
AACATATTAA AAAGCGTTCT TCAATCAGAC ATGGAAAAAA TAAAGGCAAC TTTGGAAGAA
ATTGACCAGG AAAGCTTTAA TAATATTGTT AAAAGTATTT TAAACGCCAG AAAGATATAC
ATTCTCGGGG TAAGGAGTTC TGCTCCTCTT GCAAGTTTTC TGGGCTTTTA CTTCAACCTG
ATATTTGACA ACGTAAGGCT TGTACACACT ACAAGTGTCA GTGAAATGTT TGAGCAGATA
ATTCATGCTT CCCGCGGAGA TGTAGTTATA GGAATAAGCT TCCCGAGGTA TTCCAAAAGA
ACAATAAACG CCATGCGTTT TGCCCAAAAC CAGGGAGCCA CCGTTGTTGC AATCACGGAC
AGCCTTTATT CTCCTTTGGC AAAAAACGCG GATCATGTTA TTACAGCAAG AAGCGACATG
GCTTCTTTTG TTGACTCACT GGTTGCACCT TTGAGTGTAA TAAATGCATT GATTGTGGCC
ATTGGAATGA GCAGAAAACC GCATGTACAA GAAACCTTCG AACGTCTTGA GAAGATATGG
GACGAGTACA AAGTGTATGA AAAACAAGAT TACGATTCCA ATTACGGAGA GGAAGATTAA
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| Protein sequence | MDMDKEQDLL KRIQAGMPGF SKGQKLIANF IINHYDKAAY MTAAKLGEEV GVSESTVVRF
ANEIGFDGYP KLQKVLREMN KSKLTAVQRI EVTSSRINEG NILKSVLQSD MEKIKATLEE
IDQESFNNIV KSILNARKIY ILGVRSSAPL ASFLGFYFNL IFDNVRLVHT TSVSEMFEQI
IHASRGDVVI GISFPRYSKR TINAMRFAQN QGATVVAITD SLYSPLAKNA DHVITARSDM
ASFVDSLVAP LSVINALIVA IGMSRKPHVQ ETFERLEKIW DEYKVYEKQD YDSNYGEED
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