Gene Cthe_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0576 
Symbol 
ID4808251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp704628 
End bp705290 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content42% 
IMG OID640105990 
Productribulose-5-phosphate 3-epimerase 
Protein accessionYP_001037005 
Protein GI125973095 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.885825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATTA AAATTGCTCC ATCCATACTT TCGGCGGATT TTTCAAAGCT TGGCGAAGAG 
GTACTTCGGA TAGAAAAAGC CGGAGCTGAT CTGGTACATA TAGATGTTAT GGATGGACAT 
TTTGTACCTA ATATAACAAT TGGTCCTCCT GTGGTAAAGT CGCTAAAAAA GGTGTCAAAG 
CTGCCCTTTG ACGTTCACCT GATGATTGAA AATCCTGACA TGTACATAGA AAGCTTTGCC 
GATGCCGGAG CTGATATTAT TTCAGTTCAT GCGGAAGCTT GCCGTCATCT TCATAGAACA 
ATTCAGAAGA TTAAGCAGCT CGGGATAAAA GCTGCTGTAG CCTTAAATCC TGCCACTCCT 
TTATGTGCTG TGGAATGGGT GATGGAAGAT GTGGATATGA TTCTTCTTAT GACGGTCAAC 
CCGGGGTTTG GGGGGCAGAA GTATATAAAC GGAGTAACCC GTAAAATAGA AGAGTTGGAA 
AGGATTGTCG AAAGCAGAGG ACTTAATATT GATATAGAGG TGGACGGCGG AATAGACACT 
GAAACTGTTC AATACGTTAC AAAAGCCGGT GCAAATGTCA TCGTGTCAGG TTCTACCATA 
TTTGCTGCGG AAGATACTGC AAAAATAATT CAAGAGCTTA GAATGAACTC GTACAGGAAA 
TAG
 
Protein sequence
MLIKIAPSIL SADFSKLGEE VLRIEKAGAD LVHIDVMDGH FVPNITIGPP VVKSLKKVSK 
LPFDVHLMIE NPDMYIESFA DAGADIISVH AEACRHLHRT IQKIKQLGIK AAVALNPATP 
LCAVEWVMED VDMILLMTVN PGFGGQKYIN GVTRKIEELE RIVESRGLNI DIEVDGGIDT 
ETVQYVTKAG ANVIVSGSTI FAAEDTAKII QELRMNSYRK