| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0540 |
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| Symbol | |
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| ID | 4808289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 658587 |
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| End bp | 661193 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640105954 |
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| Product | hypothetical protein |
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| Protein accession | YP_001036969 |
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| Protein GI | 125973059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.34537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTT TTTACAAATT AACACTAAAA ATTCTTGAAA AGAACAAGGC AAGAACCCTC
GTCACCATCA TTGGAATTAT TTTATCCGCA TCAATGATTA CGGCGGTCAC ATGCTTTATT
TCAAGTCTTC AGGACTTTTT GGTGGATATG GTTGTTGCAC GGGAGGGAGA CTGGTACGGC
GTAGTATATG ACGTGAAAAA AGAACAGATT GAAAGTTTAA AGAAAGATAA AGAGGTAAAA
TCCGTGGTAT GGCTTCGGAA AATTGGCTAT GCATGGCTCG AAGGCTCTCA GAACGAGTAC
AAGCCGTATT TGTTTATAGG AGCGATGGGA GAAGGATTTA AGGATTCAAT GCCGATTCAT
TTGACAGAAG GAAGAATGCC GGAAAGCAAC TCTGAAATTA TCCTGCCGAA ACATGTGGAG
ACCAACGGCG GAGTGAAATT TAAAATTGGA GATATACTGT CCCTTGAAAT CGGCGACAGG
ATTTCCGACG GCTTTAAGCT TAACCAGAAC AATTCCTATT TGCATGAGAA AGACGGTGGT
GAAACAGAGG AATTGGTAGT TAGGGAACGA CGTACTTTCA CTGTTGTGGG ATTTTATGAA
CGCCCGGGAT TTGAGCCTTT TATTGCGCCG GGATATACCG CATTGACAGT TGAAGACAAC
AATGCTTTTA GCAGTTATGA TTATGATGTT TATATTAAAA CAAAGAAGAT GAGTGGTATT
ATTGATTTTA TGGACGAAAA ATTTCAAGGA CATGGTAGAA GAATCAACGA TGACCTTTTG
AGATTCAGCG GAGTTATATA TGATCCAACT TTCAAGGGAA TATTGTATGG ACTTGCCGGA
ATATTAATTG CCCTTATAAT GTTCGGTTCC ATCCTGCTTA TATACAATGC TTTTTCAATA
TCCGTCAATG AACGGACCAA ACAATTTGGA ATTTTGGCGT CTATCGGTGC AACCCGGCGG
CAAATGCTAA AAAGTGTGTT GTTTGAGGCT TGTTTCTTAA GCCTTATAGG GATTCCCTTT
GGCATATTGG CAGGAGTTTT GGGAATAGGG GTAACGCTGA AATTGACCGA AGATCTGTTT
GTGTCTTTTT TACAGGTGGA TAACGGTGTG GTTCTGGACC TTCATGTATC CCTGGGAGCT
GTTGTGGTTG CCATAGTGGT TGGTTTTGCT ACCGTGCTGA TTTCGGCGTA TATTCCCGCA
AAACGCGCCT TAAGAATATC GCCCATTGAT GCCATCCGGC AGACTCAGGA TATTAAAATT
GAAGCCAAAA AGGTGAAAAC ATCAAAGCTT GTCTATAAAC TCTTTGGATT TGAAGGTATG
ATTGCAAGCA AGAATTTCAA ACGCAACAGA AGAAAATATC GTACCACGGT GGTTTCGCTT
TTCATGAGTG TGGTGCTGTT TATATCATCA AGCAGTTTCT GTGCTTATAT TACGAAAAGT
GCAAATTCGG TTGTACGACG CCTGGATTAT GACATATCAT ATACTTTTAC ATCGGATCTT
AAAGAAAAAT ACTCTTTTGA CGAATTGTAC GGGGAACTGT CTCAAATAAA CGGTGTTGCC
GACAGCAGTT ACGGATATTT TTATAGAGAT TTTGAATATG CAAAAATACC GACCGGATTG
TTGAATAAAG AATATATAAG TCATTTGGAA AAGAGGTATG GAGAAAACTA TATGGAAACT
GACTTAGAAT ATTATCTTGT TAACATCCGA GTATACTTTG TGGATGATGT CACGTATGAA
AAATATCTTA AAGAGAATTC TTTAGCCAGT AATACAAATA GAAATTCCAA CGTACCGCAT
GCCGTTGTGG TTGATTCTAT GAAATTTTAT GATGCGCAGC AGAAAAAACA TTATACTTTA
AACCTTCTTG ACGAAGGAAT TCACGATATT ACCGTGGAAA TGCTGAAAGA AAGAGAGGAT
GCGGCCGGAG AAAAGATTGA TATTGTCGGT GTGACTGACA GTGTACCTTT GGGTGTGCAG
GATAATTTAC CATATATGTT GACCGTTATA TATCCTTTCA GTGCAATTTC CGCACTGCAG
GAGGGTAAAA ACGGTGAAGT TGATGTAACG ATGTATTTTA AGACCGAAGA TCACAGGATT
GTTTTTGACA GGATATACAA GGTTTTAAAT GAAAAAGGAC TTCCTGTGTC AAGATTAATC
AATTATGCAG AAACAGATGA GGCAAACCGT GCTCTAATTA CCATTGTCAA TGTCTTTTCC
TATGGTTTTA TCGTTTTAAT ATCCCTGATA GCCCTGGCCA ATGTGTTTAA CACCATTTCA
ACAAATATTT CGCTTCGCCG CCGTGAGTTT GCAATGTTAA AGTCCATAGG AATGACGGAG
AAAGGGTTTA GCAAAATGAT GAATTATGAA TGCCTGCTGT ACGGAATAAA AGGACTTATG
TACGGTATTC CGGTGTCCAT TGGTGTAACT TATCTTATTT ATCGAAGTAT TGCGGAAGGA
TTGGAAACGA AGTTTTTTGT CCCGTGGTAC AGTATGGCTA TTACTGTTGG AAGCGTGTTT
ATAGTAGTGT TTTCAACAAT GCTGTATTCC ATGAGCAAGA TAAAAAAGGA CAACCCCATT
GACGCACTCA GAAATGAGAA TTTATAA
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| Protein sequence | MNVFYKLTLK ILEKNKARTL VTIIGIILSA SMITAVTCFI SSLQDFLVDM VVAREGDWYG
VVYDVKKEQI ESLKKDKEVK SVVWLRKIGY AWLEGSQNEY KPYLFIGAMG EGFKDSMPIH
LTEGRMPESN SEIILPKHVE TNGGVKFKIG DILSLEIGDR ISDGFKLNQN NSYLHEKDGG
ETEELVVRER RTFTVVGFYE RPGFEPFIAP GYTALTVEDN NAFSSYDYDV YIKTKKMSGI
IDFMDEKFQG HGRRINDDLL RFSGVIYDPT FKGILYGLAG ILIALIMFGS ILLIYNAFSI
SVNERTKQFG ILASIGATRR QMLKSVLFEA CFLSLIGIPF GILAGVLGIG VTLKLTEDLF
VSFLQVDNGV VLDLHVSLGA VVVAIVVGFA TVLISAYIPA KRALRISPID AIRQTQDIKI
EAKKVKTSKL VYKLFGFEGM IASKNFKRNR RKYRTTVVSL FMSVVLFISS SSFCAYITKS
ANSVVRRLDY DISYTFTSDL KEKYSFDELY GELSQINGVA DSSYGYFYRD FEYAKIPTGL
LNKEYISHLE KRYGENYMET DLEYYLVNIR VYFVDDVTYE KYLKENSLAS NTNRNSNVPH
AVVVDSMKFY DAQQKKHYTL NLLDEGIHDI TVEMLKERED AAGEKIDIVG VTDSVPLGVQ
DNLPYMLTVI YPFSAISALQ EGKNGEVDVT MYFKTEDHRI VFDRIYKVLN EKGLPVSRLI
NYAETDEANR ALITIVNVFS YGFIVLISLI ALANVFNTIS TNISLRRREF AMLKSIGMTE
KGFSKMMNYE CLLYGIKGLM YGIPVSIGVT YLIYRSIAEG LETKFFVPWY SMAITVGSVF
IVVFSTMLYS MSKIKKDNPI DALRNENL
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