Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0477 |
Symbol | |
ID | 4808330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 591028 |
End bp | 592014 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105891 |
Product | flagellar motor switch protein FliM |
Protein accession | YP_001036908 |
Protein GI | 125972998 |
COG category | [N] Cell motility |
COG ID | [COG1868] Flagellar motor switch protein |
TIGRFAM ID | [TIGR01397] flagellar motor switch protein FliM |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00127431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGAGATA TTCTGTCTCA AAATGAAATA GACGATTTAC TAAAGGCCCT GAATACAGGT GAACTGGATG TCCAGCAAAT CAGTTCCAAA ATCGAGGAAA GGAAGATAAA AACCCACGAT TTCAGAAGGC CCAGTAAATT TGCAAAAGAT CATGTAAGGA CTTTAAATGT TATCCACGAC AACTATGCAA GAATTATCAC AAACTTCCTT TCAGGATATT TGAGGACTCT GGTTCAGGTA GAAGTTATTT CCGTTGAGCC GATAGCTTAT TATGAATTCA ACAATTCAAT ATCAAATCCT GCGGTGCTTG CAGTTATTGA TTTTGCTCCG CTGACAGGAT CAATTATCCT TGAAATGGCA CCACCTGTTG CTTATGCACT GATTGACAGG ATTCTCGGCG GAAAAGGCTT GCCAATTGAA AGAGTAAGGG AGTTTACGGA AGTTGAGATT GCCATTATCG AAAGAATTAT CATACAGCTT GTAAACCTTA TGAGAGAGCC GTGGGAAAAC GTGGTGGAAC TTAAACCCAG GCTTGAGAAA ATTGAAACCA ACGCCCAGTT TGCACAGATA GTCTCGGCCA ATGAGACGGT GGCTTTGATT ACTTTGGGAG CAAAAATCGG CGAAGTTGAA GGAATGATTA ATCTTTGCAT TCCTCATATA GTAGTAGAAC CAATAGTTTC AAAACTGAAT ACGAAGTTTT GGTTTTCCAG TGTTGAAAAA GAAGCAACAA AAGAAGACAA AGAAACCATT CAGAAAAAAA TTGAGTATAC AAAAGTACCT GTCAGAGCAA TACTGGGAAG AGCAACCATT CAAGTGGCTG ATTTTCTTGA ATTACAACCG GGGGATGTAA TAACTCTGGA TTCAAACGTC AACGGAAATC TTGATGTATT GGTGGGTGAC TTGCTGAAAT TCCGTGGTTC TCCCGGGGTT AAGAAAAACA GGAATGCGAT CAAAATAACC GAAGTAATAA GAAGGGAGGA TGAGTAG
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Protein sequence | MGDILSQNEI DDLLKALNTG ELDVQQISSK IEERKIKTHD FRRPSKFAKD HVRTLNVIHD NYARIITNFL SGYLRTLVQV EVISVEPIAY YEFNNSISNP AVLAVIDFAP LTGSIILEMA PPVAYALIDR ILGGKGLPIE RVREFTEVEI AIIERIIIQL VNLMREPWEN VVELKPRLEK IETNAQFAQI VSANETVALI TLGAKIGEVE GMINLCIPHI VVEPIVSKLN TKFWFSSVEK EATKEDKETI QKKIEYTKVP VRAILGRATI QVADFLELQP GDVITLDSNV NGNLDVLVGD LLKFRGSPGV KKNRNAIKIT EVIRREDE
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