Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0286 |
Symbol | |
ID | 4808504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 353826 |
End bp | 355100 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640105698 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_001036718 |
Protein GI | 125972808 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.136894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAC CGGTATACAC AATTCTGATT GTAGATGACA ACGAAAATAA TTTGTTTTCT TTGAGAACTC TTATCGAAGA ACATATAAAT GCAGATGTAA AAGAAGCTAA TTCGGGAGAA AAGGCATTAA AAATTTTGTT TAAAGAGAGA GTGGATCTTA TCATTCTTGA TATTCAAATG GAAGGAATGG ACGGCTTTGA GCTCGCTTCG ATAATAAAAA AGAGAAAAAA GACAAGCAGT ATACCTATAG TTTTTCTGAC TGCTTCCTAT ATCGGTGACG AGTTTCAAAG AAGAGGATTT GAGATTGGTG CTGTGGATTA CCTGACAAAG CCTATTGACG AATACCAGCT TATTAACAGA ATTAATGTCT ACCTGAAAAT GATAGAAAAA GAAAGGACTA TGAACATACT TCTTGAAAAA AGGGTAAGGG AGCAGACAGA AGAATTAAGG GCTGCAAAAG AAGCAGCAGA AGCGGCGAAT GAAGCCAAAA GCATTTTTCT TGCCAATATA TCTCATGAGC TTAGGACTCC CATCAACATC CTGTACAGCA CAACACAGAT AATTAATTCA TATCTCAATG AGGACAAGGT TCTTGACAGA GAAAAAATTC GAAGTAAGAT AGCCATGCAG CAGCAAAACT GCTATCGTCT GTTGAGGCTT GTCAACAATC TCATTGACAT TACCAAAATA GATTCAGGTT ATTTTGAACT TAAATTCTCT CGTTGCAATA TAGTTGAAGT GGTTGAAAAT ATTACTTTAT TGGTTGTGGA ATATGCCAAA AACAAAGGGG TCTCCCTCAT ATTTGACACC GATGTGGAAG AAAAGATCAT TTCCTGCGAC CAGAATGCAA TGGAGCGAAT AATATTAAAC CTTTTGTCCA ATGCGATAAA ATTCACGCCG AGGGGAGGAT CTATAAAGGT TGAGGTGAAA GACTGCGGCA AGACTGTTGC AATAAGTGTG AAAGATACCG GAATAGGAAT CCAGGAGGAT AAACTGGAAA TGATTTTTGA AAGGTTCAAG CAGGTGGATA ACCTTTTGAC CAGAAAAAAT GAGGGAAGCG GTATTGGTTT GAGCCTGGTC AAATCACTGG TGGAACTGCA CGGCGGAAAG ATCAGTGTAA AGAGTGAGTA CAACAGGGGA AGCGAGTTTA CGGTTGAACT TCCCGCGGAT CTGGAAAACG GGGAAAATCC TTCAATGGAT GCGGCGGACA GAAAAGAAGA AAACGAAAAC AAGCAGCACA ATGTGCATAT AGAATTTTCT GATATATACT ATTGA
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Protein sequence | MQEPVYTILI VDDNENNLFS LRTLIEEHIN ADVKEANSGE KALKILFKER VDLIILDIQM EGMDGFELAS IIKKRKKTSS IPIVFLTASY IGDEFQRRGF EIGAVDYLTK PIDEYQLINR INVYLKMIEK ERTMNILLEK RVREQTEELR AAKEAAEAAN EAKSIFLANI SHELRTPINI LYSTTQIINS YLNEDKVLDR EKIRSKIAMQ QQNCYRLLRL VNNLIDITKI DSGYFELKFS RCNIVEVVEN ITLLVVEYAK NKGVSLIFDT DVEEKIISCD QNAMERIILN LLSNAIKFTP RGGSIKVEVK DCGKTVAISV KDTGIGIQED KLEMIFERFK QVDNLLTRKN EGSGIGLSLV KSLVELHGGK ISVKSEYNRG SEFTVELPAD LENGENPSMD AADRKEENEN KQHNVHIEFS DIYY
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