| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0229 |
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| Symbol | |
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| ID | 4808577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 276040 |
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| End bp | 277059 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640105641 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001036661 |
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| Protein GI | 125972751 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0115301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGAG TAATATTAGT CACCGGTGCG GCAGGCTTTA TCGGTTTCCA CTTGGTACAG
CGCTTGTTAA AAGAGGGTTG TAACGTCGTA GGTATAGATA ATTTAAATGA GTATTACGAT
GTTAAACTGA AAAAAGACCG CCTGAAATTG TTAAGTGAAA ATAAAAACTT TGTATTCCGC
AAAGTTGACA TAAAAAACAA AAAGGCAGTG GACCGTATCT TTGAAACCTA TCGGCCTTCC
TATGTAATCA ATCTTGCGGC ACAAGCGGGA GTGCGTTATT CCATTGAAAA TCCCTATGCC
TACGTGGATT CAAATTTGGT AGGATTTGTG AACATTCTTG AGGCTTGCCG AAAATACCCT
GTGAAGCACC TTATCTATGC TTCATCAAGT TCGGTATACG GGGGAAACAA AGTTTCGCCG
TTTTCCACCA GACATAATGT GGACCATCCT GTGTCTCTTT ATGCAGCCAC AAAAAAATCC
AATGAATTGC TGGCCCATAC CTACAGTCAT CTTTTCGGCA TTCCCACAAC AGGGCTGAGG
TTTTTTACCG TTTACGGCCC CTGGGGAAGA CCGGATATGG CGTATTTCTC ATTTACAAAA
GATATTTTAA GCGGAAACCC CATTAAAGTG TTCAATTATG GTAAAATGGA AAGAGACTTT
ACTTATATTG ATGATGTGGT GGAAGGAATT GTAAAATTAA TTGACAGAAT CCCGACGCCT
AATGAAAACT GGGATGAAAC TAAAGATGAC ATAAGTACCA GTTTTGCACC GTACAAAATC
TACAATATCG GCAACAACAA TCCTGTTCCG TTAATGAATT TCATAAGTGT TTTAGAGTCA
GCTCTTGGTA AGGTTGCAAA AAAAGTATAT TTGGATTTGC AACCCGGCGA TGTGCTCAGA
ACCTATGCGG ATATTTCCGA CCTTGAAAGG GATATAAATT TCAAGCCGTC CACAAGTATT
GAAGACGGGC TTCGAAAATT TGTACAGTGG TACAAGGAGT ATTATAAAGC TGAAATTTAG
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| Protein sequence | MEGVILVTGA AGFIGFHLVQ RLLKEGCNVV GIDNLNEYYD VKLKKDRLKL LSENKNFVFR
KVDIKNKKAV DRIFETYRPS YVINLAAQAG VRYSIENPYA YVDSNLVGFV NILEACRKYP
VKHLIYASSS SVYGGNKVSP FSTRHNVDHP VSLYAATKKS NELLAHTYSH LFGIPTTGLR
FFTVYGPWGR PDMAYFSFTK DILSGNPIKV FNYGKMERDF TYIDDVVEGI VKLIDRIPTP
NENWDETKDD ISTSFAPYKI YNIGNNNPVP LMNFISVLES ALGKVAKKVY LDLQPGDVLR
TYADISDLER DINFKPSTSI EDGLRKFVQW YKEYYKAEI
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