Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0213 |
Symbol | |
ID | 4808631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 260094 |
End bp | 260867 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640105626 |
Product | hypothetical protein |
Protein accession | YP_001036647 |
Protein GI | 125972737 |
COG category | [S] Function unknown |
COG ID | [COG5523] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAATTAG GCAGGTTAAA GAGAAGGGCG AGGTTCCAGC TAAGCAACAA TGGAGCTAAT CTGGCGCTTT TATATATGAT GACCATGGCA TTTTATATTC TTTTGTTTTT GTTGCTGGGG CGTTTCAGCC TTCAGACTGC ATTAATAATT AACGGTCCGG TTTTGCTGGG ATTTACAATT TATTTTCTTG CTATAGCAAG GGTGGAAAAA GAGCCCAGAA CAAGAAAAGA AAAGGAAGAA AAGGATAAGG AGAAAAAGCT TAAAGGAAAA TTTACTGTCT TCGGGATGGA AATAAAGCTT GGAAAAAAGA TAAAAATAAA TCTCGATACG GCGGAACATC CTTACCGCGT CAGTTTAAAA TATGTGTTTT ACGGTTTTAA ATATTTTATA AACGCTGCTG CGCTTTATAT CTGGACTACC CTTTTGATAT TGGTTTGGTC GCTTTTATTG ATTGTTCCTG GAATAATCAA GGCCCTTGAT TTGAGTATGA GCTTTTTCAT ATTGGCTGAC AATCCAACAA TGGATATCAG AAAAGCGGCA GATTTGAGTA CGAAAATAAT GAAAGGCCAC AGGAAAGAGT TGTTTTTGCT TACCTTGAGC TTTATAGGCT GGATATTAAT TTCAATATTT ACTTTTTCCG TTGGTTTTGC CATTACGATA CCGTATATTA TGACTACCTA TGCACTTTTT TATGATGAGG TTAAAAAACA GAGTATAGAA AACGGAATTA TTGCAGAAGA TGAAATTGGA ACCAGAAGGT TGTGGGAATA TTAA
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Protein sequence | MELGRLKRRA RFQLSNNGAN LALLYMMTMA FYILLFLLLG RFSLQTALII NGPVLLGFTI YFLAIARVEK EPRTRKEKEE KDKEKKLKGK FTVFGMEIKL GKKIKINLDT AEHPYRVSLK YVFYGFKYFI NAAALYIWTT LLILVWSLLL IVPGIIKALD LSMSFFILAD NPTMDIRKAA DLSTKIMKGH RKELFLLTLS FIGWILISIF TFSVGFAITI PYIMTTYALF YDEVKKQSIE NGIIAEDEIG TRRLWEY
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