Gene Cthe_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0169 
Symbol 
ID4808657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp206225 
End bp207307 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content40% 
IMG OID640105580 
Productdehydrogenase (flavoproteins) 
Protein accessionYP_001036603 
Protein GI125972693 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTCG CAATAATCGG CGGAGGACTG TCCGGCCTTT CTTGCGCTCA CGAACTGGAA 
AGGCACGGTA TCAGCCCGGT AATATTCCAC AGAAACGGAT ATATAGGGGA TCAATACAGC
CATATTTCGG TCCTTCTGGA AATTCAGCAC AGGCCAATAA AGGATGCAAT AAAATACATT
AAGAAAAATT TTGACATAAG CATAACCCCC GTCAACACCG TTAACACCCT TACACACTAT
TCTCCAAACA GGAAAACAGT GATTAAGGGT AATTTTGGTT TTTTCCTGAA AAGAGGACGG
GATAAAGATT CACTGCCCAT GCAGCTTTTT TCCCATCTTA AAACCTCCAA AATAAACTTT
AATACTTACG GAGACATTGA TCCTTTGGCA AAGGAATTTG ACTACGTGGT TGTTGCAAAC
GGAAACACCG TGTTTACCAA TCAATTGGGA TGTTGGTATC CTACAATCAA AACATACATA
AGAGGTGCGG TTTTATTGGG AGATTTCGAT CCAAACAATC TTATCATGTG GATCAACAAA
GATTATTGCA AAAACGGATA TGCTTATCTT TCACCTTTTA ACAGTAAAAA GGCTTCAGTC
ATATTGGTAG TAACCGACGT AAATGAAAAA GAAATTGACC ATTATTGGAA GGCCTTTTTG
GACTACGAAA ATATAAATTA CACCATTGTG GAAGAATTCA AGCAGGCTCA TGACACAGGG
TTTGCCTATC CTCACAAAGT GGACAACATA TATTTTGTCG GAAATGCCGG CGGTGCAATA
GATCCGTTTT TAGGCTTTGG CCAGTTAAAC TCCATAGAAA TGGGAGTCAT GGCCGCCCGG
TCCATTGCAA ACGGAGATGA TTATGAAAGG CTTCTTAAAC GTGTGACAAA GCACAACCAA
CAGCTTTATC AAATGAGGAA AGCCTTTAAT ACCGCCGACA ACGATACTTA TGATTCTCTG
CTGGCTTCCA TAGGGTTTCC GGGAATTCGT CATCTTTTAT ACAACACAAG GTTTGACGTA
GTAAAAAACT TTGCCCGGAT ATACCGGTTA AAAGAAAAAT TGGAGAATCG TAAAAAACAA
TAA
 
Protein sequence
MKVAIIGGGL SGLSCAHELE RHGISPVIFH RNGYIGDQYS HISVLLEIQH RPIKDAIKYI 
KKNFDISITP VNTVNTLTHY SPNRKTVIKG NFGFFLKRGR DKDSLPMQLF SHLKTSKINF
NTYGDIDPLA KEFDYVVVAN GNTVFTNQLG CWYPTIKTYI RGAVLLGDFD PNNLIMWINK
DYCKNGYAYL SPFNSKKASV ILVVTDVNEK EIDHYWKAFL DYENINYTIV EEFKQAHDTG
FAYPHKVDNI YFVGNAGGAI DPFLGFGQLN SIEMGVMAAR SIANGDDYER LLKRVTKHNQ
QLYQMRKAFN TADNDTYDSL LASIGFPGIR HLLYNTRFDV VKNFARIYRL KEKLENRKKQ