| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0134 |
|---|
| Symbol | |
|---|
| ID | 4808692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 163619 |
|---|
| End bp | 164590 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640105545 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001036568 |
|---|
| Protein GI | 125972658 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG CAAGCTCGAA ATTTGTGGAT AATATTGCTA TTGAGAAACT TCTCAATGAA
AAACTTCTTA GAGTTTCTCA CAGACCTAAA AATTTGTTTT ATGATGATGA AAAAGTATTT
GACGACCTTT GCAAGTGTGA AACGGATATG TCAAAAGTTA AACTTGCAGA AGGGGATAAA
AACTTAAAAC GTTTTGAATT TCCGTCTTTT CTGAAGACAG AGGAATATAT TGAAAACAAT
ATTGTGTATC TTTATTATCA TCCTGCAAAA GATCCGGTAT GCAATATTTT GTTATTGCAT
GGCTTGTATG ATGATAATAT GCTTAATTAC GGATTTTTAA CAAGAATGTT AAACGAACTT
AAGTTCAACG TGTTTCTTAT GGAATTGCCT TTCCATTTTA ACAGGAAACC GGCGGAAAGT
TTTTTCAGCG GAGAATATTT TATAAGTGCA GATCTTTTGA GAGCCCGCAA TGCTTTTATT
CAAAGCATTT ATGATATTGA GGCTTCCCGG AACCTTATTG GAAATATCAA TACTTTGCCG
TGTTTGCTTG TCGGGTTTAG CATGGGAGGG TGCATATCTT TCAGGTATCA CATGCTAAGA
GACAGTTTTA AGGGAACTTT CTTAATCAAC CCGGTTACGG ATATGCTGTT GCTGGTATGG
GACAATCCGC TGCTGGTTAA GGTTAAAAAG GACCTCGAGG ACAGCGGTGT GGGAAAAGAA
CAAGTTATGG ACGTTTTTAG AATTATAGAC CCTTGTGAAA ATATTAACAC AAGGTTTAAT
ACCGACAATA TTGCGGTTGT GTATTCCATA TATGATCAAA TTGTGGGAGA GGAAAAGAAC
GCAATATTTG TTGAGAAAAT TAAGAAAGCG GGTTTGAAGA AAATACTTGA ATATCATGCG
GGGCATCTGA ACATTTTGAG AGTGCCGAAG CTTTCCAATG ATATTTATGA GTTTTTTATG
AGTTGCCTGT GA
|
|---|
| Protein sequence | MNEASSKFVD NIAIEKLLNE KLLRVSHRPK NLFYDDEKVF DDLCKCETDM SKVKLAEGDK
NLKRFEFPSF LKTEEYIENN IVYLYYHPAK DPVCNILLLH GLYDDNMLNY GFLTRMLNEL
KFNVFLMELP FHFNRKPAES FFSGEYFISA DLLRARNAFI QSIYDIEASR NLIGNINTLP
CLLVGFSMGG CISFRYHMLR DSFKGTFLIN PVTDMLLLVW DNPLLVKVKK DLEDSGVGKE
QVMDVFRIID PCENINTRFN TDNIAVVYSI YDQIVGEEKN AIFVEKIKKA GLKKILEYHA
GHLNILRVPK LSNDIYEFFM SCL
|
|---|
| |