Gene Cthe_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0089 
Symbol 
ID4808713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp122493 
End bp123356 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content39% 
IMG OID640105498 
Productrod shape-determining protein MreC 
Protein accessionYP_001036523 
Protein GI125972613 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTTTTG TTAAAAACAA GCATTTTATA TTGCTGACGG TAACGGTGGC AATTTTGATT 
ATAATAGGGC TTTCTGCGAG AAAAAACAGC AAAATAAATA CTGTCAGCAA TGTTGTTACC
GTTGCGTTAA GTCCCTTTCA GGAGTTTATT AATTATCTGG GAGACAGGGT AGAGGGGGCC
GCTAAATATT TTCAGGATAT TGAGGCGTTA AGTCAGGAAA ATGAAGCGTT GAAGGTACGG
ATTAGCGAGC TGGAAAAAGA AGTAAAAGAG CTTTCCGACT ACAGGGAAAA GAACAAAGAG
CTTAAAGAGG CGTTAAATAT AAAGGACCAA TTCAGTGATG TGGAATTTCT TGGTGCGAAT
ATTATTGCCA AGGATATGGG GAACTGGTTC CATACTTTTA CAATAGACCG GGGAATAGCC
GATGGTGTTA CCGTTGATTC GGCCGTAATA ACAAAAGACG GACTTGTGGG AAGAGTGATA
AGCACCGATC TTTTTACTTC CAAGGTAATT ACGATTATTG ACGAAGACAG TACGGTAAGT
GCAAGAGTGT CCAAAACAAG GGATTTGGTT TTTGTCAAAG GTGATTTGCA GCTTAAAAAT
CAGGGATTGT GCAGACTGGA CAATATTTTT CCCGACATGG ATATAGCGGT GGGAGATACG
ATAGAGACTT CAGGATTGGG AGGCATATAT CCAAAAGGTA TTATTATAGG CAAAGTCAAG
GAAGTCAGAC GTAAAACCAA TGATCTCAAC AGGTATGCAA TTATTGAGCC TGCCGTTGAT
TTTAAACGGC TTGAAGAAGT GTTTGTGCTG GAAAGCAAAA ATAATAAAGA TAATTATGAA
AAAGTAGGCG AAGACAACAA ATGA
 
Protein sequence
MRFVKNKHFI LLTVTVAILI IIGLSARKNS KINTVSNVVT VALSPFQEFI NYLGDRVEGA 
AKYFQDIEAL SQENEALKVR ISELEKEVKE LSDYREKNKE LKEALNIKDQ FSDVEFLGAN
IIAKDMGNWF HTFTIDRGIA DGVTVDSAVI TKDGLVGRVI STDLFTSKVI TIIDEDSTVS
ARVSKTRDLV FVKGDLQLKN QGLCRLDNIF PDMDIAVGDT IETSGLGGIY PKGIIIGKVK
EVRRKTNDLN RYAIIEPAVD FKRLEEVFVL ESKNNKDNYE KVGEDNK