Gene Csal_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1975 
Symbol 
ID4027215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2230827 
End bp2231990 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID637967171 
Productflagellar basal body FlaE 
Protein accessionYP_574026 
Protein GI92114098 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTT CACAATCATT GAGCGGGGTC AACGCGGCCT CCTCTCAACT GGACACCATC 
GGCAACAATA TCGCCAACTC GCAGACCGTG GGCTTCAAGA GCTCCTCGGT GCAGTTCGCG
GATATCTTCG CCAATAGCCA GGGCCTCGGC ACACGTGTCG CGGGCAAGCT TCAGGATTTC
GGTACCGGCA GTCTGGAAAC CACCGGCCGC GGTCTCGACC TGGCCATCGC CGGGGACGGC
TTCTTCCAGT TCACCCAGAA CGAACAACTG GCCTACTCGC GCAACGGCCA GCTCAGCATG
AGCGCCGACG GCTACTTCGA GAATGCCCAG GGTGCGCGTT TGACCGATCA GCAAGGCGAG
CCGCTGCAGG TCACACAGTT CAGCCAGGGG GCTCAGGCGA CGACTGGCGT GGAGACAGCA
TTCAACCTGA ATGCCGAGAC TGAGGCGCTT GCACCCAATA ATTTTAATCA AGACCAAAGC
GATACCTATA GCTACGTAAC CAATGCCGGT ACCGTCTATG ACTCCCTGGG CGTCGCACAC
GACATGAGTC TTTATTATAC GAAGACGGGT GAAAATGACT GGGAGGTTCG AGCTGCACTC
GATGGTGAGA TGGCTGATGG TGGTGCCGCG CAATCCATAA GCTTTAATGA AAGTGGTGTT
CCTGACGTTG ATACTGCCTT GAGCTTTAAC TTCGGCGACT TGGGAAATGG GTCAGCCGAC
TTCGATAATA TTGAGGTCGA TTTGGCAGGG ACTACCCAGT ATGGCGAAGC TTTCGAGCTG
AGGGAGTTCG CTCAGGACGG TAATGCTTCC GGTACCTTCG TGGGCGTGGA AATCACCGAG
AACGGTGAAG TCCTGGCCAA TTACTCCAAC GGCAACAGTG AAGCGGTCGG TACCGTCGGC
ATGGCCAACT TCCGCAACCC GGAAGGCCTG GAGCCTCAGG GCGACAACCT GTGGGCGGCG
ACCCAGGAAT CCGGCGCGGC CCTGCTGGGA CAGGCAGGTA CCGGTCAGCT GGGCAGCCTG
GAATCGGGCA CGCTGGAGGC CTCCAACGTG GACCTGACCC AGGAACTGGT CGACATGATC
ATCGCGCAGC GCAATTTCCA GGCCAACAAC AACGCCATCC AGACTCAGTC CGACATTCTG
GAAACGGTCA CCAACTTGCG TTAA
 
Protein sequence
MGFSQSLSGV NAASSQLDTI GNNIANSQTV GFKSSSVQFA DIFANSQGLG TRVAGKLQDF 
GTGSLETTGR GLDLAIAGDG FFQFTQNEQL AYSRNGQLSM SADGYFENAQ GARLTDQQGE
PLQVTQFSQG AQATTGVETA FNLNAETEAL APNNFNQDQS DTYSYVTNAG TVYDSLGVAH
DMSLYYTKTG ENDWEVRAAL DGEMADGGAA QSISFNESGV PDVDTALSFN FGDLGNGSAD
FDNIEVDLAG TTQYGEAFEL REFAQDGNAS GTFVGVEITE NGEVLANYSN GNSEAVGTVG
MANFRNPEGL EPQGDNLWAA TQESGAALLG QAGTGQLGSL ESGTLEASNV DLTQELVDMI
IAQRNFQANN NAIQTQSDIL ETVTNLR