Gene Csal_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1939 
Symbol 
ID4025874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2195925 
End bp2196242 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content59% 
IMG OID637967135 
Productsterol-binding 
Protein accessionYP_573990 
Protein GI92114062 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.530915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACG CCAACACCGT CATCGAGAAG TTACAGTCAC GTTTCGATCC TGCCGCCGCT 
CGGGGCATGG ACGAAATCTT CCAGTTCCAT ATCACCGATG CCGATGACTA CTACCTCAAC
GTCAAGGACG GGACACTCGA CATCCAGCCC GGCGAGCACG ACGACCCATC CGTCAGCCTG
ACCACCGACA CCGAAACCCT CAAAGGCGTG ATGAACGGCG AGATCAACGG CATGCAGGCC
TTCATGAGCG GTAAGCTGAA GGCCACCGGC AACGTCATGC TGGCCACCAA GCTGACCAGC
CTCTTCCCCG GTCACTGA
 
Protein sequence
MADANTVIEK LQSRFDPAAA RGMDEIFQFH ITDADDYYLN VKDGTLDIQP GEHDDPSVSL 
TTDTETLKGV MNGEINGMQA FMSGKLKATG NVMLATKLTS LFPGH