Gene Csal_0392 details

Gene Information

• Locus tag: Csal_0392
• ID: 4026571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 438265
• End bp: 438969
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637965541
• Product: AraC family transcriptional regulator
• Protein accession: YP_572453
• Protein GI: 92112525
• COG category: [K] Transcription
• COG ID: [COG2207] AraC-type DNA-binding domain-containing proteins

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCGCG TGGAGGTGCG CGAATATCCG GATCGCGTCT TGACCGATCG TCACGGGTTC 
CATCAGTGGC TGATCGGGCT CGAGGGCGTC GTCGAGCTGG AAGCCGGCGG CGAAGGGGCG 
CACGTGGAGC CCGGGCAATG GGTCGCCATT CCCAGCGGCA GCGAGCATCA CTATCTGGCG 
CCGGGACGCA ACCGCACCCT GGTGCTGGAT CTGCCCGTGG CCTGGTGCGA GGCGGCCGGA 
CTGGCCGATA TCGCGCCGCG TCGCCTGCCG CCTGCGGCGC TGGGCGGGGG CGAGATGCTC 
CTCGAGGCGC GTCCCGACCA GTTGGCGGCC CGTCTGCATG CGCTGCTCGC GCAAGGCCGG 
ACGCGGCATG CCTCGCCACG CCTGCGGCTG CTGCACCTGT TGCCGGCAGT CGAGGCCGAC 
CTGGCGTATC CCTGGCGGAT ACGCGACTGG GCGGCGCGCT GTCACATGAC GGAGGCCGCC 
TTCGCACGCC GTTTCCGGCA TTTGACCGGG GTCGCCCCGC ATGCCTGGTT GACCGCGCGG 
CGTCTTCAAC GTGCCTGTGA GCTGATGCGC GACCCCCGGC TGACGCTCAC CGAGATTGCA 
CAAGCCTGCG GGTTTCACGA TAGCGCACAC TTCGCACACG CCTTTCGGGC CCACCACGCA 
TGCTCGCCGC GCCAGTGGCG GCAACGTCAG CCGTCCAGTG TCTAG 

 

Protein sequence

MPRVEVREYP DRVLTDRHGF HQWLIGLEGV VELEAGGEGA HVEPGQWVAI PSGSEHHYLA 
PGRNRTLVLD LPVAWCEAAG LADIAPRRLP PAALGGGEML LEARPDQLAA RLHALLAQGR 
TRHASPRLRL LHLLPAVEAD LAYPWRIRDW AARCHMTEAA FARRFRHLTG VAPHAWLTAR 
RLQRACELMR DPRLTLTEIA QACGFHDSAH FAHAFRAHHA CSPRQWRQRQ PSSV