| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7284 |
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| Symbol | |
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| ID | 8363478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 9106426 |
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| End bp | 9109782 |
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| Gene Length | 3357 bp |
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| Protein Length | 1118 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644969417 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_003126884 |
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| Protein GI | 256426231 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.884849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGTT TTTTAACTAA ACTTTTTGGC GGGCACAAGT CGGAGAGAGA TATCAAAGCT
ATCGAGCCTA TTGTGAGGCA GATCAACGCG GAGTATGAAA AACTTCAATC CCTTCCTGTA
GACCAGCTAC GTAACAAAAC GCAGGACTTC CGTTTGCGTA TCAGCACTCA TCTTGCCAAA
ATTGACGAGA CCATTGCTGA AAAGAAAGCA GAAGCCGAAA ATGCGCATGA CGTAGCCCAG
AAAGACGTTA TTTATCAGGA AATCGATAAA CTCAAGAAAG AACGTGATAC ACAGCTGGAA
GGTGTACTCA AGGAAATCCT CCCTGAGGCA TTTGCAGTTG TAAAAGATGC GGCCCGCCGT
CTCTCACAAT CACCCACCAT TACTGCTACA GCGACTCCGC TGGACAGACA GCTGGCTGTC
AGAAAAGAAT ACCTGACAAT CGAAGGTGAC AATGTGACGT GGAAAAACAG CTGGAACGCT
GCCGGTAGTC TTGTAACCTG GAACATGGTG CACTATGATG TACAGCTGAT TGGTGGTATC
GCACTGCACC AGGGTAAAAT TTCCGAAATG GCGACGGGTG AAGGTAAAAC CCTTGTATCC
ACACTGCCAG CCTATCTGAA CGCATTAGCC GGTGAAGGTG TACACGTGGT AACCGTGAAC
GACTACCTGG CTCGTCGTGA CTCTGAGTGG AATGGTCCGT TGTTCGAGTT CCTCGGTATT
ACAGTAGATT GTATTGATAA ACACCAGCCT AATACTGCTG AGCGTAGAAA TGCCTACCTC
GCAGATATTA CTTATGGTAC AAATAACGAG TTCGGCTTTG ACTACCTGCG TGATAACATG
GTGCATAGTC CGGACGAAAT GGTACAACGC AAACACCACT TCGCAATGGT CGATGAGGTG
GATAGCGTAT TGATCGATGA TGCACGTACG CCGCTGATCA TCTCTGGTCC GATCCCTCGT
GGTGACGAAC AGGAGTTCCA TGCACTGAAG CCTCGTATTC AGGCACTGGT AGAAGCACAG
CGTAAAGCCA CTAACCAGTA CCTGCTGGAA GCGAAGAAAC TGATCACTGA AGGTAAAGAC
GATGCGAAAA CAGGTGGTAT GGCGCTGATG CGTGCATGGC GTGGTTTACC AAAGAACAGC
GCCCTGATCA AGTATCTGAG CGAACCAGGT ATAAAAGTAT TGCTGCAGAA AGCAGAGAAC
TATTACCTGG CAGATCAGCA GCGTGAAATG CCGAAAGTAG ACGAAGAACT GTACTTCACT
ATTGACGAGA AAAACAACAG CGTTGACCTG ACAGAAAAAG GTATTTCACT CATCACCCGC
ACAGGAGAAG ATCCACACTT CTTCATCCTC CCGGATGTGG GTTCTGAAAT AGCAGAGATC
GAAAAGAGCG GTCTGACAGC AGATGAAAAA CTGCACCAGA AAGATATCCT GCTCCAGGAC
TTTGCACAGA AATCTGAACG TATCCACTCC ATTCAGCAGT TGCTGAAAGC ATACACCCTC
TTCGATAAAG ATGTGGAGTA TGTGGTAATG GATGGTAAAG TAAAAATCGT TGACGAACAG
ACAGGTCGTA TCCTGGATGG CCGTCGTTAT TCCGATGGTC TGCACCAGGC GATCGAGGCA
AAGGAAAACG TGAAAGTAGA AGCTGCTACG CAGACATTCG CTACCGTTAC CCTTCAGAAC
TACTTCCGTA TGTATCACAA ACTGGCTGGT ATGACCGGTA CAGCAACTAC AGAAGCGGGT
GAGTTCTGGG AAATCTACAA ACTGGACGTG GTAACCATCC CGACCAACCT GCCTATCACC
CGTAAAGATG CGGAAGATCT GGTTTACAAA ACAAAACGTG ATAAATACAG AGCGGTAATA
GATGAAGTAA AGCAATTACA GGCTGCCGGT CGTCCGGTAC TGGTAGGTAC TACTTCCGTA
GAAGTATCCG AATTGCTCGG CAAAATGCTG ACCTTCGAAA AAATCCCTCA CAATGTATTG
AACGCTAAAC AGCACGCCCG TGAAGCACAG ATCGTTGCAG AAGCTGGTCT TCCAGGCGCT
GTGACCATCG CTACCAACAT GGCAGGTCGT GGTACGGATA TCAAACTCGG ACCTGGCGTA
AAAGAAGCTG GTGGTCTGGC CATCATCGGT ACTGAACGTC ACGAAAGCCG TCGTGTTGAC
CGTCAGCTGC GTGGTCGTGC CGGTCGTCAG GGAGATCCGG GTACATCCCA GTTCTTCGTA
TCCCTGGAAG ATGACCTGAT GCGTATGTTC GGTTCTGACC GTATTGCTGG TCTGATGGAC
CGTATGGGCT ACAAAGAAGG TGAAGTGATC CAGCACAGCA TGATCACCAA ATCCATCGAA
AGAGCACAAC GTAAAGTAGA AGAAAACAAC TTCGGTATCC GTAAACGTCT CCTCGAATAC
GATGACGTAA TGAACAAACA ACGTACGGTG ATCTACGCTA AACGTAATCA CGCACTGTTT
GGCGAACGTC TGTCCATCGA TATCGACAAC TCCTTCTACG ATGTAGCAGA AAACGTCGTT
ACTACACATA AAAACAGCGG TGACTACGAA GCATTCAAAC TGGATGCCAT CCTGAACTTC
GGTATCGATA CCGATATCAC CCAGGAAGAA CTGAACCGTA CAGATACCAC CGCGCTCTCT
ACCCGTCTTT ACCAGCAGGC AAAAGACAAC TACGAGCGTA AGACTTCTGA ACTGGCACAG
CAGACACTGC CTGTTATCGA GCAGATCCAC CGCGAACAGG GTCATCATAT CGAAAACATT
TCCATCCCGT TCACCGATGG TAAAAAAGGT ATGAACATCC TTGCGAATCT GCAGAAAGTA
GTTGACACCA AAGGTTTCGA AACCATCAAC GCACTGGAAC GCAGCATCAC GCTGTCGCTG
ATCGATGAAG CATGGAAAGA ACACCTGCGT GCAATGGATG ATCTGAAACA ATCCGTTCAG
AACGCCGTGT TCGAACAGAA AGATCCATTG CTGATCTATA AATTCGAAGC ATTCAATCTC
TTCAAAGACC TGAATGCAGA AACGAACCGC GAGATCGTAT CCTTCCTGTG CCGTTCAGGT
ATCCCTGTTC AGGAAGATAA CCGTCCGCAG CAACAGCAGC AGGAACTTCC ACAGCAACCA
GCATCACAAC CACAGATCCG TGAGGGTCGT GAAGAAAAAA CTGATATGAG CCGTATGCGC
GCTACACATC AGGAATTCGA TGGCGGTGAT GCCGCTGTAG CAGAAGATTA TGCGGCGGCT
AACGCGGAAC AAATGAAACA GGAGCCTGTG AAAGCAGGTC CGAAAGTCGG CAGGAATGAT
CCTTGTCCTT GCGGAAGCGG TAAGAAGTAC AAACAATGTC ACGGAAAAGA TTTTTAA
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| Protein sequence | MLGFLTKLFG GHKSERDIKA IEPIVRQINA EYEKLQSLPV DQLRNKTQDF RLRISTHLAK
IDETIAEKKA EAENAHDVAQ KDVIYQEIDK LKKERDTQLE GVLKEILPEA FAVVKDAARR
LSQSPTITAT ATPLDRQLAV RKEYLTIEGD NVTWKNSWNA AGSLVTWNMV HYDVQLIGGI
ALHQGKISEM ATGEGKTLVS TLPAYLNALA GEGVHVVTVN DYLARRDSEW NGPLFEFLGI
TVDCIDKHQP NTAERRNAYL ADITYGTNNE FGFDYLRDNM VHSPDEMVQR KHHFAMVDEV
DSVLIDDART PLIISGPIPR GDEQEFHALK PRIQALVEAQ RKATNQYLLE AKKLITEGKD
DAKTGGMALM RAWRGLPKNS ALIKYLSEPG IKVLLQKAEN YYLADQQREM PKVDEELYFT
IDEKNNSVDL TEKGISLITR TGEDPHFFIL PDVGSEIAEI EKSGLTADEK LHQKDILLQD
FAQKSERIHS IQQLLKAYTL FDKDVEYVVM DGKVKIVDEQ TGRILDGRRY SDGLHQAIEA
KENVKVEAAT QTFATVTLQN YFRMYHKLAG MTGTATTEAG EFWEIYKLDV VTIPTNLPIT
RKDAEDLVYK TKRDKYRAVI DEVKQLQAAG RPVLVGTTSV EVSELLGKML TFEKIPHNVL
NAKQHAREAQ IVAEAGLPGA VTIATNMAGR GTDIKLGPGV KEAGGLAIIG TERHESRRVD
RQLRGRAGRQ GDPGTSQFFV SLEDDLMRMF GSDRIAGLMD RMGYKEGEVI QHSMITKSIE
RAQRKVEENN FGIRKRLLEY DDVMNKQRTV IYAKRNHALF GERLSIDIDN SFYDVAENVV
TTHKNSGDYE AFKLDAILNF GIDTDITQEE LNRTDTTALS TRLYQQAKDN YERKTSELAQ
QTLPVIEQIH REQGHHIENI SIPFTDGKKG MNILANLQKV VDTKGFETIN ALERSITLSL
IDEAWKEHLR AMDDLKQSVQ NAVFEQKDPL LIYKFEAFNL FKDLNAETNR EIVSFLCRSG
IPVQEDNRPQ QQQQELPQQP ASQPQIREGR EEKTDMSRMR ATHQEFDGGD AAVAEDYAAA
NAEQMKQEPV KAGPKVGRND PCPCGSGKKY KQCHGKDF
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