| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7234 |
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| Symbol | |
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| ID | 8363428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9039006 |
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| End bp | 9042365 |
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| Gene Length | 3360 bp |
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| Protein Length | 1119 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969368 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126835 |
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| Protein GI | 256426182 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.507309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACT CCGGTATTTT GTCAGGGATG CCTATGCGCT CATCCCGGCT GATATATTAT
TTACCTGATC TCTTATTTAA GCTGATGCGT ACTGTGATCA TGATAATGAT GGTGCTGTGC
ACGACAACAT TACTACTGAT GGCCCGTCCC TCCAGTGGAC AGGACCTCAA TACCGTCATG
TTGCAGCTCA ACGCCAAAGA AGGCAAACTG GATAAAGTAC TGAAGCGTAT CGAAACGCAG
GCGCCCTTCT TTTTTATTGT GGATGGCGCT CTCGCCAGCA GCATTCCTAC TCCGGCCATC
GAGGGAACGA AACGTTCGTT AAAAGATATG CTGGATATAC TGCTGCCCGA TGAATTGTTC
TATGTACAGG ATGGTAATTA TATTATCATC AAAAGAAGAC CTATGTCTGC CGCTATGCAG
GCGGTAGCCG AAGGTATTAC CCCTCCTGCG GGAGTTGCAA AAGTCATTAC CGGGATAGTG
ACCGATGAAA AAGGGCAGCC GCTTCCTGGT GTAAGTATCG TTGTAAAGGC ATCCCGTGCT
GGTACCATGA CAAACGATAA AGGTGTCTTT TCACTGGAAG CCAGGGGCGA TGCAGATACA
TTGCTGATCA GCTATATCGG CTATCGTACA CAGGAAGTAG CTGTAAAAGG TCGTAGTCAG
CTGAATATCC AGCTGGCTTT AAGTGAAAAC TCACTCGCTG ATGTTGTAGT GATCGGGTAT
GGTAGTCTGC GGAAAGGCGA CCTGACCAGT GCTGTTGCTA CCGTAAAATC AGAGAGCTTC
GTTAAAGGCA ATGTATTGGA TGCCGGTCAG CTCTTACAAG GTAAAGTAGC CGGTTTGTCC
ATCGGTACGC CCAGTGGCGA TCCAACCAGC GGTTCACAAA TCCTGTTGCG TGGTAATACG
ACATTGCTGG GTGCGAATGC CAATCCGCTG GTATTGATAG ATGGTATCCC CGGCGATCTC
AAGACCGTTG CGCCGGAAGA TATAGAATCA GTAGACGTAC TGAAAGATGG TTCAGCGGCC
GCTATTTATG GTACCCGTGG TACAAACGGC GTGATCATCA TTACCACCCG AAGGGCCAGT
GGTACATTCA ATAACTCCGT GGATTACAGT GGATATGTCA GCACACAGAC GATTGCCCGC
AAACCTGATA TGCTGACTGC GGATGACTAT CGCAAGCAGA TTGCCGAAGG GCTGAGAGAC
GCTTCCTGGA ATCAGGGGGG CAATACTGAC TGGTTAAAAG AAATATCACA GACACCGCTG
ACACATGTGC ATAACCTGAC TTTCAGAGGG GGGAATAGTA AAACCAACTA CCTCGCCAAT
GTGAACTACC GTTCCCTGGA AGGTATTATG AAGAAATCGG ACAACCGTAC CTTTACAGGT
CGTATCGATA TCAATCACAG TATGCTGGAT GATAAACTCC GTATCAATCT CGGTATGCTG
AACGCCAATA ACAAGTATAC GACTACCGGT GATGGTTTCA GTTTCAATGG TTATACCTAC
AGACAGGCAA TGATCCGGAA CCCCACTTCA CCGGTACGTG ATTCCGCCGG AAACTGGTAT
GAGCAGACAG GGCTCTTCAA CTATGAAAAC CCTTTGTCAA GATTGTATGA GAGCGATGGG
CGTAATACAT CCCAGAATTC GCGCTTAAAT GGTTCGCTGA CACTCTTGCC TGTCGAAGGA
CTGAAACTGT CTGCATTGTT CTCTTATACA CGTTACAATG AAGACAGAGG GTATTCAGAG
ACCAAGCGTC ATATCTCCAC CCTGAGAGAC GGCCGGAATG GATATGCTTC TGTAGGAAGT
ACGCAATCTA TTGACCGGCT CATGGAACTG ACAGCACAGT ACAACAAGAA TGTCGGACGA
CATAAATTTA CCGTACTGGG TGGTTACAGT TACCAGGAAA ATGAATTTAA TACACATTGG
GCACAGAACT GGGATTTCCC GACGGACCGC TTTACCTATA ACAACATCGG TATCGGACAG
GCACTGAAAG AAGGACTTGC GCCGGAATAC AGCGAAAAGA GAGAAACAAA CCTGATTGGT
TTCTTCGGAA GAGCGACTTA TAGTTTTGAT GACCGCTATC TGTTAATGGC CAGTTTGAGG
CATGAAGCCG CCAGTCAGTT GTACGGAACG AAACAACCAT GGGGTAACTT CCCGGCGATA
TCCGCAGGAT GGCGCATCAG CAATGAAGCA TTCATGAAAA GACAAAGTCT GTTTGATGAC
CTGAAACTCC GCGTAGGATA CGGTGTTACG GGTACACAAC CGACTGACTT ATTCCTGGGT
GTGGCCATTT TGAGCTATGG TGCTTATGTA TACTCCAATG GCGTATGGAT ACAGACACTC
GGCCCTTCAC AGAACCCTAA TGCAGATCTG CGTTGGGAAG AAAAACACGA AACGAATGCC
GGTGTTGACT TCTCCATGTT ACAGGGCAGG ATCAGTGGTA GCGTAGATTA CTACATCCGC
CGTATCAATG GACTGTTGTA TGATTATCAG GTGCCTAGTC CGCCGAACCT CTTTTCTTCT
ACCCGTGCAA ACGTAGGTAA GATGGAAAAC AAAGGTCTGG AAGTGATTGT GAACTTTATC
CCTGTCAAAA CAAAAGATTT TGAATGGAGC AGCAGTGTAA ACTTCTCTAC CAATACCAAT
AAACTGCTTA GTCTTTCCAA TAATGTTTAT AAGGCGACCA ACAACTATTT CACCACAGGT
GGTACCGGTG AGCCGATCCA GACATTCACA CATATTGTGA ATATCGGAGA CAAGATCGGT
GACTTCTACG GATTCAAAGT AGCAGATATT TCTCAGGATG GTAAATGGAT CTATGAAGGT
CGTGACGGTA AACCTGTCAA TTATGATGAT TACCAACATG CCTTTGAAGA CAAACGTGTA
TTGGGAAATG GTTTGCCAAA ATATTACGGT GGATGGAATA ACAGCTTCCG CTACAAACAG
TTTGATCTGA ATATCACCAT GCGTGGTGCA TTCGATTATC AGATACTGAA CTTTCAGCGG
ATGTATTATG AGAATACCGG TCTGCAACAA TACAACCGCC TGAAATCAGC TTATGACAAA
GTGCTGGGTA AGGCAGTACT AAGCAAGGAT ATGCCGCTGG AGTTTAATAG CTACTATGTG
GAAGATGGTG ATTTCTGGAA GGTGGATAAT ATCACACTGG GCTATAATAT CCGTAACCTG
AAATCAAAAT ATCTGCATGC TGCAAGATTG TATGTATCCA CGCTTAACAC TTTTGTGATT
ACAGGTTATA AAGGAATAGA CCCTGAAGTT AACAGACTGG GACTGGCGCC TGGTGTTGAC
GACAGGGATA AATATCCGTC TGTGAGAACA TTTACTGTTG GTGTAAACAT AAGTTTCTGA
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| Protein sequence | MKYSGILSGM PMRSSRLIYY LPDLLFKLMR TVIMIMMVLC TTTLLLMARP SSGQDLNTVM
LQLNAKEGKL DKVLKRIETQ APFFFIVDGA LASSIPTPAI EGTKRSLKDM LDILLPDELF
YVQDGNYIII KRRPMSAAMQ AVAEGITPPA GVAKVITGIV TDEKGQPLPG VSIVVKASRA
GTMTNDKGVF SLEARGDADT LLISYIGYRT QEVAVKGRSQ LNIQLALSEN SLADVVVIGY
GSLRKGDLTS AVATVKSESF VKGNVLDAGQ LLQGKVAGLS IGTPSGDPTS GSQILLRGNT
TLLGANANPL VLIDGIPGDL KTVAPEDIES VDVLKDGSAA AIYGTRGTNG VIIITTRRAS
GTFNNSVDYS GYVSTQTIAR KPDMLTADDY RKQIAEGLRD ASWNQGGNTD WLKEISQTPL
THVHNLTFRG GNSKTNYLAN VNYRSLEGIM KKSDNRTFTG RIDINHSMLD DKLRINLGML
NANNKYTTTG DGFSFNGYTY RQAMIRNPTS PVRDSAGNWY EQTGLFNYEN PLSRLYESDG
RNTSQNSRLN GSLTLLPVEG LKLSALFSYT RYNEDRGYSE TKRHISTLRD GRNGYASVGS
TQSIDRLMEL TAQYNKNVGR HKFTVLGGYS YQENEFNTHW AQNWDFPTDR FTYNNIGIGQ
ALKEGLAPEY SEKRETNLIG FFGRATYSFD DRYLLMASLR HEAASQLYGT KQPWGNFPAI
SAGWRISNEA FMKRQSLFDD LKLRVGYGVT GTQPTDLFLG VAILSYGAYV YSNGVWIQTL
GPSQNPNADL RWEEKHETNA GVDFSMLQGR ISGSVDYYIR RINGLLYDYQ VPSPPNLFSS
TRANVGKMEN KGLEVIVNFI PVKTKDFEWS SSVNFSTNTN KLLSLSNNVY KATNNYFTTG
GTGEPIQTFT HIVNIGDKIG DFYGFKVADI SQDGKWIYEG RDGKPVNYDD YQHAFEDKRV
LGNGLPKYYG GWNNSFRYKQ FDLNITMRGA FDYQILNFQR MYYENTGLQQ YNRLKSAYDK
VLGKAVLSKD MPLEFNSYYV EDGDFWKVDN ITLGYNIRNL KSKYLHAARL YVSTLNTFVI
TGYKGIDPEV NRLGLAPGVD DRDKYPSVRT FTVGVNISF
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