| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7188 |
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| Symbol | |
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| ID | 8363382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8979151 |
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| End bp | 8980467 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969322 |
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| Product | sugar transporter |
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| Protein accession | YP_003126789 |
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| Protein GI | 256426136 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCTT ATCCTGTTAG AATAGCGTTA ATCGCTGCCC TTGGCGGGTT CCTGTTTGGC
TTTGAAACGG CGGTTATATC CGGCGCAGAG AAAACGATTA TGGAATTATG GTCGCTCAGT
CCCTTCTGGC TGGGCTTTAC AGTGGCTTCG AGCCTGATCG GTACTGTGTT AGGTTCGCTG
GTAGTGGGCG TACCTGCCCG TATCTATGGC CGTAAGAAGG TACTGTTGGT CATCGCCGGT
TTGTATATTG TTTCAGCTAT TGGCTGTGCT TCTATTTCAG CCTGGCTGTT GTTTGTATTA
TTCCGTTTTT CTGCCGGTGT GGCCGTAGGT GCTTCTTCGG TAGTCGGACC GATGTATATT
TCCGAGATAT CGCCGGCACA TTTACGCGGC CGTCTGGCCG GTTCTTTCCA GCTGAATATT
GTAGCGGGGA TCTTTATTGC CTATCTGACC AACTTCCTGT TTGTCGGTAT GGGAGATGAG
TCCTGGCGCT GGATGCTGGG TATCATGGTG GTACCGGCGG TCTTGTTTGG TATTCTGCTG
CGTACGATTC CTGAAAGTCC GCGCTGGCTG ATCCTGAATA ACCGGGAATC GGAAGCTGTA
CCTATTTTAC AACGTTTACA GGAAACGAAT GTCGATGCGG CTATCCGTGC GATCAGGGAG
TCTGTAAAGA CCCACCAGGA GAACCTGTTC CAGAAGCGCT ATGCAAAACC GATTATTTAT
GCGGTATTGC TGGCGATGTT CAACCAGTTG TCAGGTATTA ACGCGATCCT GTATTATGCG
CCCCGTATTT TCGAACTGGC GGGCTTTAGT AAAGAGCAGG CTTATCTGCA ACCGGTATAT
ATAGGAGCGG CTAATCTTAT ATGTACTTTG CTGGCGATGA CGGTGATTGA CAGATTTGGT
CGTAAGACGC TGTTACTGAT TGGTTCTGTG GGAATGATCG TTTTCCTGGG ACTGACGGCC
TACGCTTTCC GCGATCCGGC CACTCTGGGT GGTAATGTAC TGATCTATCT GATAGGTTAT
ATTGCGTTTT TCGGCTTCTC CCAGGGGGCG GTGATATGGG TATTTATATC TGAGATTTTC
CCGAATTCTG TACGGTCGCA GGGAGGTGCA TTGGGTAGCT TTACCCACTG GATCATGGCT
GCCATTATTT CCTGGACCTT TCCGATTATT GTGTCAGGAA GTGTGATGGG AGGTTTCTAT
TCCTTTGTAT TCTATAGTGT TATGATGCTT TTACACCTGC TGTTTGTCTG GAAGATGATG
CCGGAGACCA AAGGCCGGTC TTTGGAGGAA ATCCAGAAAG AGCTGGGTAT AGAATAA
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| Protein sequence | MFSYPVRIAL IAALGGFLFG FETAVISGAE KTIMELWSLS PFWLGFTVAS SLIGTVLGSL
VVGVPARIYG RKKVLLVIAG LYIVSAIGCA SISAWLLFVL FRFSAGVAVG ASSVVGPMYI
SEISPAHLRG RLAGSFQLNI VAGIFIAYLT NFLFVGMGDE SWRWMLGIMV VPAVLFGILL
RTIPESPRWL ILNNRESEAV PILQRLQETN VDAAIRAIRE SVKTHQENLF QKRYAKPIIY
AVLLAMFNQL SGINAILYYA PRIFELAGFS KEQAYLQPVY IGAANLICTL LAMTVIDRFG
RKTLLLIGSV GMIVFLGLTA YAFRDPATLG GNVLIYLIGY IAFFGFSQGA VIWVFISEIF
PNSVRSQGGA LGSFTHWIMA AIISWTFPII VSGSVMGGFY SFVFYSVMML LHLLFVWKMM
PETKGRSLEE IQKELGIE
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