Gene Cpin_7186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7186 
Symbol 
ID8363380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8977212 
End bp8977541 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content44% 
IMG OID644969320 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003126787 
Protein GI256426134 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTT TTATTGAAGA CAAAGATATT CCCTGGGAAA ACCCTGATCC GGGCATACGC 
CGGAAGGTAA TGGCTTATAA TGAGCAATTA ATGATGGTAA AGGTAGAGTT CCAGCAAGGG
GCTGTAGGGG CATTACATTC GCATTATCAT ACCCAGATGG CGCATGTGGA AAGTGGGGTG
TTTGAGATTA CCATTGATGG CGAGAAGAGG ATACTGAAAG CGGGAGATGC ATATTATATA
CCGTCCAATG TGGTACATGG CGCAGTATGT CTTGAGCCGG GTGTGCTGAT TGATGTATTT
AATCCGTACA GGGAGGATTT TATAAAGTAA
 
Protein sequence
MNVFIEDKDI PWENPDPGIR RKVMAYNEQL MMVKVEFQQG AVGALHSHYH TQMAHVESGV 
FEITIDGEKR ILKAGDAYYI PSNVVHGAVC LEPGVLIDVF NPYREDFIK