Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7158 |
Symbol | |
ID | 8363352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8944303 |
End bp | 8944839 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644969293 |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_003126760 |
Protein GI | 256426107 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGT TCAATGTTCC ATCAAGAGAA GAAGTAAGTG CCAACAATCA GACACTGTTT GACAATCTGA AAAAAGGTCT GGGTAAAGTG CCTAACCTGT ATGCAACAAT GGCTTATTCT GAAAATGCAT TGGCTACCTA CCTGGCATTA TCAACCGGTA AAACCTCATT GAAAGCAAAA GAGAAGGAAG TAGTGAATCT GGTTGTAAGC CAGGTGAATG ATTGTGACTA CTGTCTGGCG GCACACACTT ATATTGGTAA ACTGAACGGC TTTTCTGATG AACAGATCAT AGAGATCCGC AAAGGTAGCG CCTCTTTCGA TCCTAAGCTG AACGCACTGG CTGCACTGGT TAAAAACCAG GTGGAAAACA AGGGTAAAGT GGATCCTGCG CTGGTAGATG CATTCTTTGC TGCAGGTTTT ACAAACGAAA ACCTGGTAGA TGTGATCATC GTGATTGGTG ATAAGGTAGT GACCAACTAT CTGTATGCTG CAACGAAAGT GCCGCTTGAT TTCCCTGCTG CACCAGCATT ATCTTAA
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Protein sequence | MKTFNVPSRE EVSANNQTLF DNLKKGLGKV PNLYATMAYS ENALATYLAL STGKTSLKAK EKEVVNLVVS QVNDCDYCLA AHTYIGKLNG FSDEQIIEIR KGSASFDPKL NALAALVKNQ VENKGKVDPA LVDAFFAAGF TNENLVDVII VIGDKVVTNY LYAATKVPLD FPAAPALS
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