Gene Cpin_7126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7126 
Symbol 
ID8363319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8915502 
End bp8916368 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content43% 
IMG OID644969260 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003126728 
Protein GI256426075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATACA TACTACTAAG CGTCATTTGC AGCGTAACGG TATCCGTGTT GCTGAAACTG 
GCTAAACGCT ACGAGATCAA TATCCTCCAG GCCATCACCA CCAATTATAT TGTTGCTGCC
GGCTTCAGTT TTCTGCTCTA TCAGCCTGAC CTGGCACAAG TCACTGCCAG CTCTCCCTGG
TGGGCATTCA TCAGCTTAGC ACTATTGCTG CCATCCGTAT TTCTGATCTT AGGCGCTTCT
GTTAAGCAGG CTGGTATCGT TAAAACCGAT ATTGCACAAC GCCTGTCTTT GTTCATATCA
ATTGTTGCCG CCTGGTTGCT GTTTAAAGAG ACCTTTAACA ACTATAAAAT AATTGGTCTG
ATACTGGGTT TTGTAGCTAT CTTCTTTGTG CTTCGCAAAC CACAGCAGCA AGCCAGTGAA
CGTAATCAGT CATTAGCCCC GCTATTCGTA TTCCTTGGCT TTGGTATCAT CGATATCTTA
TTCAAGCAGG TAGCTTTGGC AAAAGAAGTG CCTTACACCA CCTCCCTGTC CCTTATTTTT
ATATTATCAT TCATCGTTGC TGTTGTCATC TCAGCGGTAC GGATTATTGT AAAAAAAGAG
CAGGTACGTG TAAAGAATAT TCTCTGCGGA GTCATCCTCG GGATCTTCAA TTTCGGGAAC
ATCCTGTTTT ATATGAAGGC GCATAAATTA CTGCATAACA ATCCTTCTAC TGTTTTCGCA
GCGATGAACC TGGGAGTGAT CGTCGTTGGT AGTCTGACGG GTATTATCAT TTTTAAAGAA
AAGCTCAACC GCTATAATTA CGCAGGTATT ATCCTTGCTA TCATCGCAGT GATCTGTATT
ACCTTATCGC AGATTTACGC GTCTTAA
 
Protein sequence
MLYILLSVIC SVTVSVLLKL AKRYEINILQ AITTNYIVAA GFSFLLYQPD LAQVTASSPW 
WAFISLALLL PSVFLILGAS VKQAGIVKTD IAQRLSLFIS IVAAWLLFKE TFNNYKIIGL
ILGFVAIFFV LRKPQQQASE RNQSLAPLFV FLGFGIIDIL FKQVALAKEV PYTTSLSLIF
ILSFIVAVVI SAVRIIVKKE QVRVKNILCG VILGIFNFGN ILFYMKAHKL LHNNPSTVFA
AMNLGVIVVG SLTGIIIFKE KLNRYNYAGI ILAIIAVICI TLSQIYAS