Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7061 |
Symbol | |
ID | 8363253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8835008 |
End bp | 8835901 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644969194 |
Product | ABC transporter related |
Protein accession | YP_003126663 |
Protein GI | 256426010 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.505096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACTA TTCTATCCCT TAACAACATT TCAAAGCGGT ACGGACACGT ACAGGCGCTG GACGGCGTAT CATTTGATAT TCCGGCAGGC AGCGTGTATG GTATACTCGG ACCAAACGGT AGTGGTAAAA CCACGATGCT GGGTATTGTG ACCGACGTAC TGAAAGCGGA TGCCGGTTCT TTCACCCTGA TGGAGCAGAC ACCTTCTGCC GCACAGCGCA GGAAGATCGG AACGCTGTTG GAAACGCCTA ATTTCTATCA CTATCTGTCG GCGTATAAAA ACCTGCAGAT AGTCGCTAAT ATCAAACAGA CAAGCGAACA GGATATTCCC CGGGTGCTGG AACTGGCCGG ATTAGTGGCC AGACAGCACT CGGCTTTTAA GACTTACTCC CTGGGTATGA AACAGCGGCT GGCTATTGCA GCAGCAATGC TGGGCGATCC GGAGGTCCTG ATACTGGACG AACCTGCCAA TGGGCTGGAT CCGGTAGGGA TTGCAGAGGT GAGAAATCTG ATCCGCCAGC TGGCACAGTC GGGTAAGACC ATTATTATGG CCAGTCACCT GCTGGATGAA GTGGAAAAAG TTTGTACACA TGTGGCTATC CTGCGGAAAG GGAAGTTGTT GGGTTCAGGT CCGGTGAACG CAGTCCTGTC CAGGGATAAT TTTATCGAGA TCGGCGGGCC TGATAATCAG GCACTGTCAC AGCTGATAAA ACAGCATCCG GCCTTTGTAC AGGTATTGCC TGGTCAGGAC GGTATTTTGC AGGTCACTTT CCGCGAAACG ATTGATCCGG CAAGCCTGAA CAGCTGGTGC GCACAACAGG GCGTCTGGCT GAGTCATCTC CAGATGAGCA GAAAGAGCCT GGAAACGGCA TTCCTGGAAT TAACCAACAA CTAA
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Protein sequence | MSTILSLNNI SKRYGHVQAL DGVSFDIPAG SVYGILGPNG SGKTTMLGIV TDVLKADAGS FTLMEQTPSA AQRRKIGTLL ETPNFYHYLS AYKNLQIVAN IKQTSEQDIP RVLELAGLVA RQHSAFKTYS LGMKQRLAIA AAMLGDPEVL ILDEPANGLD PVGIAEVRNL IRQLAQSGKT IIMASHLLDE VEKVCTHVAI LRKGKLLGSG PVNAVLSRDN FIEIGGPDNQ ALSQLIKQHP AFVQVLPGQD GILQVTFRET IDPASLNSWC AQQGVWLSHL QMSRKSLETA FLELTNN
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