Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7047 |
Symbol | |
ID | 8363239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8818579 |
End bp | 8819508 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644969180 |
Product | domain of unknown function DUF1731 |
Protein accession | YP_003126649 |
Protein GI | 256425996 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACGG TCTTAATTAC CGGCGGCACA GGTCTCGTGG GCCGGGCACT TACAAAACTG CTTACAGAGG TAGGTTATAA GGTCATAATT CTGAGTCGCC ATGGGGAACA GGATAATGAC AATACACTTG TCAGTTATGC CCGGTGGGAC GTGGCAAGAC AGACTATTGA TGAAACAGCT ATACAACAGG CTGATTACAT CGTACACCTG GCCGGGGCCA ACGTAGCCGA TAAACGCTGG ACGGCTGCCC GCAAAAAGGA GATCTTCAAT AGCCGTACGC AGAGTGCGGC ATTGTTATAC AAGGCGCTGG AAAAGTATCC TAATAAAGTC AAAAAAGTGA TCAGCGCTTC AGGCGCCGGT TATTATGGAG AAGATAAAGG CGGACCTGCC TTTACTGAAA AAGAACCTCC TGCCGATGAT TTCCTGGGTA CTACCTGTAC TGCCTGGGAA AGTGCGATCC TGAAAATGCA GGAACTCGGG AAAAAAGTGG TCATCTTCCG GACCGGGATT GCTCTCAGCC TTGCCGGCGG CGCACTCAAA GAATTCTACA AACCTTTACA GTTTGGCTTT GCTACCATTC TTGGTAACGG AGAGCAATAT GTCAGCTGGA TACACATTCA CGACCTGGCA CGCCTGTACC TCAGTGCGAT TGTCAATCAC GACCTGGAAG GCATTTATAA CGCTGCCGCA CCCCATCCCG TACAGAATAA AGAACTGGTG ATGACCATGG CACAGGAGGC GAAAGGTAAG AGCTTCATCT CTGTACACGT ACCCACATTT GCCCTTAAAC TGGCCTTGGG CGAGATGAGT ACGGAAGTGC TGAAAAGCTG CCGCTTATCC TCTGCCAGGA TACAGGAAAC TGGCTTCGTC TTCTCTTATC CGGATATTCG CAGTGCAATG GAAAAGATAT TCCAGGAGAA AGAAAGTTAG
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Protein sequence | MDTVLITGGT GLVGRALTKL LTEVGYKVII LSRHGEQDND NTLVSYARWD VARQTIDETA IQQADYIVHL AGANVADKRW TAARKKEIFN SRTQSAALLY KALEKYPNKV KKVISASGAG YYGEDKGGPA FTEKEPPADD FLGTTCTAWE SAILKMQELG KKVVIFRTGI ALSLAGGALK EFYKPLQFGF ATILGNGEQY VSWIHIHDLA RLYLSAIVNH DLEGIYNAAA PHPVQNKELV MTMAQEAKGK SFISVHVPTF ALKLALGEMS TEVLKSCRLS SARIQETGFV FSYPDIRSAM EKIFQEKES
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