Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6893 |
Symbol | |
ID | 8363085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8630569 |
End bp | 8632218 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969026 |
Product | DNA repair protein RecN |
Protein accession | YP_003126495 |
Protein GI | 256425842 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.23585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.532581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACAGA AATTAACTAT CAAGAACTAC GCGATCATTG ATCACCTGGA AGTAGATTTC TCCGGCAACC TGAATGTTAT TACAGGGGAA ACAGGCGCCG GTAAATCTAT TGTACTGGGG GCATTGTCAT TAATACTGGG AGAGAGGGCT GATCCGGGAA TGCTACTGGA TAAGGGATCA AAATGCGTGA TTGAAGGGGT TTTCAAAGTC AGGAAATCCC AGGTGGCTGC TTTTTTCCAT GAGCACGAGC TTGATATGGA AGACCTGCTG ATCATCCGCA GAGAGATCAG CGCAGCTGGT AAATCCCGTG CATTTGTCAA TGATACGCCT GTCAATCTGG GCCAGCTGAC GGAATTAAGC CAGTACCTGG TGGACCTGCA TCAGCAGTTT GACACCCTGG AACTGGAAAA GTCCGATTTT CAGCGGGAGG TCATGGATGC CCTGGTCAAT CAACCGGCAG TAATGCAGCA ATACCAGCAG CAATACCAGC GCTATGCGCA GATACAACGC CAGCTGAAGC AGTTGCAGGA CCAGCGTGAC AATGCTAACA AAGAACTCGA TTACAACAAA TTCCTGCTGG ATGAACTGAG CGACGCTTCT TTTGCACCCA ATGAGATTGA AGATCTGGAT GCAGAACTGA AAGTGCTGAG TCATGCAGAG GAAATCCGTA ATACACTCAG TCGTGTTTAT TTTCAGCTGA ATGAAGATGA ACAGCCTATT TTACAACAGC TGAAGCAGAT CCAGTCTTCC GTACAGGCCC TGGCATCTTA TCATAAAGAG GCGCCTGCGG TCGCCCAGCG ATTACAGTCT GTATATGTAG ATCTCCAGGA TATTTCCTCA GAAATAGGTC ATATGAATGA CCAGGTACAG TTTGATGGCG CCCGTATAGA ACAGGTGAAT GAACGTGTGT CATTAGGGTA TAAGCTGTTG AAAAAACACG GTGTGCAAAA CACTGCGGAG TTACTGGTCA TCCAGGAAAA GCTCACCCAA AGTGTTGAAG GGGTACTGAA CCTGGATGAA AAGCTGGCCG GACTGGAAGC AGAAATTGCA ACTCTTCAGG CCGCCCTGCA AAAACTGGCC GAAACGATTA CGGCTGCACG TCTGAAAGTA GCTGAACCAT TTGAAAAGAA AGTGAATGCA CTGCTGGCAC AGGTAGGTAT GCCGAATGCC CGTCTGAAAG CCGCGATCAC ACAGGGTGCA CTGAATCCTT ACGGACAGGA TATCATAGAA TTCCTGTTTG ACGCCAATAA GAGCGGACAG TTTGCGCCTA TCAGGAAAGT GGCTTCCGGT GGTGAGTTAA GCCGGTTGAT GCTCTGTATC AAGTCGCTGG TAGCACGCTC TGTGGCGTTA CCAACACTGA TCTTTGATGA AATCGATACA GGTATCTCCG GAGAAGCAGC CAGACAGGTC AGCTTTATCA TGGAAGATAT GGCCCGTGGT CACCAGATCA TCTGTATCAC ACACCAGCCA CAGATCGCAG GTAAAGCAGA TGCACATTAT TTTGTGTTTA AAGACGCACG TGACGGTAAG ATCACCACGA ACGTACGCCT GCTGACAAGG GAAGAACGTA TTAATAAGAT CGCCCAGATG CTGAGTGGAG AAAAACCAAC AGCCGCGGCA CTTGAGAATG CAAGGGAGTT GGTAAAATAG
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Protein sequence | MLQKLTIKNY AIIDHLEVDF SGNLNVITGE TGAGKSIVLG ALSLILGERA DPGMLLDKGS KCVIEGVFKV RKSQVAAFFH EHELDMEDLL IIRREISAAG KSRAFVNDTP VNLGQLTELS QYLVDLHQQF DTLELEKSDF QREVMDALVN QPAVMQQYQQ QYQRYAQIQR QLKQLQDQRD NANKELDYNK FLLDELSDAS FAPNEIEDLD AELKVLSHAE EIRNTLSRVY FQLNEDEQPI LQQLKQIQSS VQALASYHKE APAVAQRLQS VYVDLQDISS EIGHMNDQVQ FDGARIEQVN ERVSLGYKLL KKHGVQNTAE LLVIQEKLTQ SVEGVLNLDE KLAGLEAEIA TLQAALQKLA ETITAARLKV AEPFEKKVNA LLAQVGMPNA RLKAAITQGA LNPYGQDIIE FLFDANKSGQ FAPIRKVASG GELSRLMLCI KSLVARSVAL PTLIFDEIDT GISGEAARQV SFIMEDMARG HQIICITHQP QIAGKADAHY FVFKDARDGK ITTNVRLLTR EERINKIAQM LSGEKPTAAA LENARELVK
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