Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6858 |
Symbol | |
ID | 8363050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8591043 |
End bp | 8591546 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644968991 |
Product | transcriptional regulator, AsnC family |
Protein accession | YP_003126460 |
Protein GI | 256425807 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0811824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACC TGGGCAATAA CAAAAAAGAT AGTGCCACCG ACAACATTGC ACTGGATGAA AAGGACATAG CAATTCTGCA ATTGCTGGAG GAAGATGCAA AAATGACTAT CCGTGACCTG GCAGCAAAGC TGAACCTGAG TGCCACCCCT GTCTATGAAC GCATTCGTAA AATGGAACAG GCTGGCGTAA TCAGGCAATA TGCCGCTATC GTTGACCCCA GCAAGATCGA TAAAGCCCTT ACCGTACTAT GTTATATTTC CCTTAAAGAG CATGGTAAAA AGGCAGGTTC AAAATTCATC AAGGAGATCA CTTCTTTCCC GGAAGTAATG GAGTGTCTGA ATATCTCCGG TCAGTTCGAT TTCATGCTCA AAGTGCAGGT AAAAGACATG CTCGCCTACC ATGAGTTTAA TGTCAACAAG CTAGGCGAGC TGGATAATAT CCGTCATATG GAGAGTGTGT TTGTAATGTC AGTCATCAAA GCAACACACA GAGTGGTATA TTAA
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Protein sequence | MNNLGNNKKD SATDNIALDE KDIAILQLLE EDAKMTIRDL AAKLNLSATP VYERIRKMEQ AGVIRQYAAI VDPSKIDKAL TVLCYISLKE HGKKAGSKFI KEITSFPEVM ECLNISGQFD FMLKVQVKDM LAYHEFNVNK LGELDNIRHM ESVFVMSVIK ATHRVVY
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