Gene Cpin_6858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6858 
Symbol 
ID8363050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8591043 
End bp8591546 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content43% 
IMG OID644968991 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_003126460 
Protein GI256425807 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0811824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC TGGGCAATAA CAAAAAAGAT AGTGCCACCG ACAACATTGC ACTGGATGAA 
AAGGACATAG CAATTCTGCA ATTGCTGGAG GAAGATGCAA AAATGACTAT CCGTGACCTG
GCAGCAAAGC TGAACCTGAG TGCCACCCCT GTCTATGAAC GCATTCGTAA AATGGAACAG
GCTGGCGTAA TCAGGCAATA TGCCGCTATC GTTGACCCCA GCAAGATCGA TAAAGCCCTT
ACCGTACTAT GTTATATTTC CCTTAAAGAG CATGGTAAAA AGGCAGGTTC AAAATTCATC
AAGGAGATCA CTTCTTTCCC GGAAGTAATG GAGTGTCTGA ATATCTCCGG TCAGTTCGAT
TTCATGCTCA AAGTGCAGGT AAAAGACATG CTCGCCTACC ATGAGTTTAA TGTCAACAAG
CTAGGCGAGC TGGATAATAT CCGTCATATG GAGAGTGTGT TTGTAATGTC AGTCATCAAA
GCAACACACA GAGTGGTATA TTAA
 
Protein sequence
MNNLGNNKKD SATDNIALDE KDIAILQLLE EDAKMTIRDL AAKLNLSATP VYERIRKMEQ 
AGVIRQYAAI VDPSKIDKAL TVLCYISLKE HGKKAGSKFI KEITSFPEVM ECLNISGQFD
FMLKVQVKDM LAYHEFNVNK LGELDNIRHM ESVFVMSVIK ATHRVVY