Gene Cpin_6852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6852 
Symbol 
ID8363044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8583475 
End bp8584128 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID644968985 
ProductMethyltransferase type 11 
Protein accessionYP_003126454 
Protein GI256425801 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.18943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.739847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCG CCGATGTAGC ACGTCAGCTG CGCGAACCGG CAGGTGAAGA CGGTGTTAAG 
GTAGGCTTGG CTATGAATAA GTCCAATGCC GCATTATATA ATATGGTACT CGACTTCTTA
GGACTGAAAC CGGGGGACAA GGTACTGGAG ATCGGTTTCG GGAATGGCTA TTTCATCCCG
GCATTATTTG AAAAAGAAGC GGCTATCCGT TACACGGGAC TGGATATGTC TGACCTGATG
GTCGAGGAAG CTACCCGTGC AAATGATGCA CGGATCGTGG ACGGCACTGT AGAACTGCAC
CTGGGCAAAG CAGAAGCCAT GCCTTTCGCA GATGGTTCAT TTACAAAGGT ATTCGCTGCG
AATGTGCTGT ACTTCTGGGA TGAACCTTCG GTGGCGTTAA GGGCCATCTA CCGGGTACTG
GAAACAGGCG GGGAGCTGAT ACTGGCGATC CGTTCGGCAG AGTCCATGAT GCAGCTGCCA
TTCAGTGCGC ACGGGTTTAC TTTATATAGT GTGGAGGATG CAGAAGCCCT CTTGCAGGAA
AATGGTTTTG CTATCGCTGA AGTGATAACG GCAACGGAAG AAGCCAAAAT TCCACAGGGT
GGCGGTGCTA CTGTTCAGCT GGAGAATATT TGTTTACGGG GAATCAAAAT TTAA
 
Protein sequence
MNAADVARQL REPAGEDGVK VGLAMNKSNA ALYNMVLDFL GLKPGDKVLE IGFGNGYFIP 
ALFEKEAAIR YTGLDMSDLM VEEATRANDA RIVDGTVELH LGKAEAMPFA DGSFTKVFAA
NVLYFWDEPS VALRAIYRVL ETGGELILAI RSAESMMQLP FSAHGFTLYS VEDAEALLQE
NGFAIAEVIT ATEEAKIPQG GGATVQLENI CLRGIKI