| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6729 |
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| Symbol | |
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| ID | 8362920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8426033 |
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| End bp | 8429143 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968861 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126331 |
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| Protein GI | 256425678 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATC TACATTTGCT GTTTGTTGCG ATGCTTCTTT CCACGGTAGC ATTGGCTCAG
ACAAGGCAGT TGCAGGGAAC TGTCAAAGAT TCTAAATCCG GTGCTCCGCT GGGTTCTGTA
AGTATTAAGG TGCAGGGGAA AAATATCTTT GCAATCACGG GTGCTGATGG CGCATTCACA
TTGAAGAATG CACCCGAAGG AGAAATTACA CTTGAAACAT CACTGATAGG TTATACTTCA
AAGGGAATTA AAGTTGCAGC TGGTCAGACT TCCGTTGACC TGAGCATGGA AGAATCTTCT
TCTCAGTTAG GTGAAGTAAC TGTAACCGCT TTGGGTATTT CCAAAGAATC CAAAAAACTC
GGTTACTCTG TCACCAAAGT GGATGGTGCT TCTCTCACAC AGGCGCGTGA AACCAACGTT
GCTTACTCTC TCGGTGGCCG TGTGGCTGGT TTGAGTGTAA GTGGTACAAA CGGTGGTCCC
GGTTCTTCTG CCCGGGTACT GTTAAGAGGT ATGGCAAGCT TTGGCGCCAG CAGCCCGCTC
TATGTTATCA ACGGTGTGCC GATGGATAAT TCACAAAGAG GTGCAGCAGG TGAGTGGGGC
GGTTCTGATA ATGGTGATGG TATCTCTAAC ATCAACCCTG ATGATATCGA AAGTATGACT
GTACTGAAAG GTGCTTCTGC ATCTGCATTG TATGGTACCC GTGCTACAAA TGGTGTGATT
CTCATTACTA CCAAGAGTGG TAAGAAAGGT ACGATGCAGG TGGAATATAA CATGAACTAC
ACACTGGATA AAGCGATCGA CTTTACAGAG TTTCAATATG AATATGGTCA GGGGCAGCAC
GGTGTAAAAC CTGCTAACGC AACTGACGCA TTGGCCAGTA CCCGTTTAAG CTGGGGTTCA
AAACTGGACG GCACCATGAC GCCGCAGTTC AATGGTAACT CGTACGCTTA TTCCGCTGTA
GATGATAATA TCAGCCGTTT CTACAGAACA GGTCCGACCT TTACCAATAC AATCGCCGTA
TCCAGCGGTG GTGAAAAAGG TACCTTCCGC GTGTCTGCTT CCAGCATGGA CAATCACTCT
GTGTTGAGGA GCAGTGGTCT GAAACGTAAA ACCTTCAACC TGAACCTGGA TCAGAACCTG
ACCAGCAAAC TCAAAGTGAG TGCTATGGTA AACTATATCG ATGACCGCTC ACAGAACCGT
CCTCAGTTGA GTGATGGTCC GCTGAATGCG AACAACGGTA TTTTCCTGGC TACAAACATT
AATGAAGATC TGCTGAAGCC AGGTTTTAAT CCTGACAACA ACGGCCGTGA GATTGTATGG
ACGGATGATA ACTATGTTAC AAACCCATGG TTTGTCGTAA ATCAGTATAT CAATAACATC
GACAGAAGAC GTTGGATCTC TGCACTGACT GTCCGTTACG ATTTCTTTGA CTTCTTATAT
GCTCAGGGTC GTGTGGGTTA TGATAATATC AACGACCGCA AATTTAAGGT AACTCCATGG
GGAACGGCTT ATTCCACAAG TACACTGCCT AATGGTACAA CCGTAAGCGG TGATCTGGAT
CTGCGTAATG AACAGTCAAC GGAGTTCAAC GCGGATGGTC TGATCGGTTT CAAAAAGAAC
ATCGTGGAAG ACCTGCAGGT AGACCTGGCT GTCGGTGGTA ACCTTCGTAA GAGAACCTGG
GAAATGGTAG GCGTAGCTGG TAACCAGTAT ATCATACCTT ATGTATATTC TTACAGTAAC
GTTACCAATT TCAGCAGGAA CTACGACTAT GAATCCAGAG AATCACAGTC TGCCTATTAC
ACTGCGGACT TCTCCTATAA AGGATTCCTG ACTATCGGAA CAACTGGTCG TTATGATGTG
TATTCTACTC TGCCTTCTGA TAACAGAAGC ATTTTTGTAC CCTCTGTATC AGGTAGCTTT
ATTTTCTCTG AGCTGCTGAA CATTCCTAAG ATGACTTATG GTAAGTTACG TGCCTCTTAT
GCGAATGCGA GTGGTGAGCC GGTGGATGCC TACATCACCA AATCTTACTA CAATGTGGGA
AGTACCATTG GTGGCGTCAG CACTGGTGAT TTTTCTTCTA CACTGCCTAA CCTGTTCCTG
AAACCATTTA CATTGAAAGA AGCGGAAGTT GGTCTGGAAC TGAAATTCTT CAATAACAGA
CTGGGGGTTG ATCTCGCTTA CTTCCACCGT AAGACGAAGA ACGAAATCAT CCAGGGTACC
ATCTCTCCGG CAACTGGTTA TGAAAAAGCT TATTTCCCGA CCGGTTCTAC CCAGAACACT
GGTTTTGAAG CACAGATCAA TGGTACAATC GTATCCAGCT CCAGTTTCAC CTGGAATGCT
TCTGTGAACG GTACTTATAT CAAGAACAAG ATCCTGGATA TTTATGGCGA CAACAGCAGC
AGTACGATCC TGACACTGGG TACCTACCGT CCGCTGAACG CAAATACGGC CCTCGTAAAA
GGTTTAGCTG GTCCGCAGAT CCTGGCGTAT GATTTCAAAC GCAATGACAA AGGTGAAGTA
CTGCTGGATA ATTCCGGTCT GCCGATCAAT GATGGTGTGC TGCGTCCAAT GGGTAGCGTA
CTGCCTAAGT TCTTCGGTGG TATCAATAAC GATTTCTCCT TTAAAGGCTT CAACCTGTCA
TTCCTGATCG ATGGTAAGTT TGGTGCGAAG ATCCTGTCTG CCACAAAAGA CTATGCGGTA
TTCCGTGGTC TGGATAAATC AACCCTGGCA GGCAGAGAAT CAGGTATCGT AGTGGATGGT
ATCATTGAAA GCACAGGACA GAAAAATACA ACGAACGTAG ATGCGCAGTC CTATTACCAG
GCATATGCGA ATAAGATCTC CAAAAACAGC GTACTGGATG CGGACTTCAT AAAACTGCGC
CAGTTAACAT TTGGTTATAC CCTGGGTAGC AAGGTAATGG GTAAAACACC ATTCGAATCT
ATCGGTATAT CACTGGTAGC ACGTAATCTG CTTACCCTCA TGCGCAAGTC TGACAACATA
GACCCAGAAT CCGGATTTTC TTCACTCATC AACTACGCAG GTATCGAAGG TACCAGTTTA
CCAAGTACCC GTACCTATGG TGTGAATGTG AACGTAAAAT TTAAAAAATA A
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| Protein sequence | MRHLHLLFVA MLLSTVALAQ TRQLQGTVKD SKSGAPLGSV SIKVQGKNIF AITGADGAFT
LKNAPEGEIT LETSLIGYTS KGIKVAAGQT SVDLSMEESS SQLGEVTVTA LGISKESKKL
GYSVTKVDGA SLTQARETNV AYSLGGRVAG LSVSGTNGGP GSSARVLLRG MASFGASSPL
YVINGVPMDN SQRGAAGEWG GSDNGDGISN INPDDIESMT VLKGASASAL YGTRATNGVI
LITTKSGKKG TMQVEYNMNY TLDKAIDFTE FQYEYGQGQH GVKPANATDA LASTRLSWGS
KLDGTMTPQF NGNSYAYSAV DDNISRFYRT GPTFTNTIAV SSGGEKGTFR VSASSMDNHS
VLRSSGLKRK TFNLNLDQNL TSKLKVSAMV NYIDDRSQNR PQLSDGPLNA NNGIFLATNI
NEDLLKPGFN PDNNGREIVW TDDNYVTNPW FVVNQYINNI DRRRWISALT VRYDFFDFLY
AQGRVGYDNI NDRKFKVTPW GTAYSTSTLP NGTTVSGDLD LRNEQSTEFN ADGLIGFKKN
IVEDLQVDLA VGGNLRKRTW EMVGVAGNQY IIPYVYSYSN VTNFSRNYDY ESRESQSAYY
TADFSYKGFL TIGTTGRYDV YSTLPSDNRS IFVPSVSGSF IFSELLNIPK MTYGKLRASY
ANASGEPVDA YITKSYYNVG STIGGVSTGD FSSTLPNLFL KPFTLKEAEV GLELKFFNNR
LGVDLAYFHR KTKNEIIQGT ISPATGYEKA YFPTGSTQNT GFEAQINGTI VSSSSFTWNA
SVNGTYIKNK ILDIYGDNSS STILTLGTYR PLNANTALVK GLAGPQILAY DFKRNDKGEV
LLDNSGLPIN DGVLRPMGSV LPKFFGGINN DFSFKGFNLS FLIDGKFGAK ILSATKDYAV
FRGLDKSTLA GRESGIVVDG IIESTGQKNT TNVDAQSYYQ AYANKISKNS VLDADFIKLR
QLTFGYTLGS KVMGKTPFES IGISLVARNL LTLMRKSDNI DPESGFSSLI NYAGIEGTSL
PSTRTYGVNV NVKFKK
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