| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6718 |
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| Symbol | |
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| ID | 8362909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8411182 |
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| End bp | 8413599 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968850 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003126320 |
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| Protein GI | 256425667 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.960052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACTA AATTTAACCG ACTTCCGGGG CTGTTATGTC TCCTATGTGC AATGTTTGTG
GCTATGCCAG CCTTTTCAAT CGATGAACCC CTTTCCGCTA TCAAGGGTAA AGTAGTTACA
GGTGATGGTG TTGCTGTTCC TTATGTGGCA GTACAGATCA AAGAAAGAAA TAAGGGAACA
GTGACTAATG AAAAAGGCGA ATTCATTTTC AAAAGAATGC AACCAGGTCA CTATACCATC
CAGGTGATGT TAATGGGTTA CAAGAGCATC ACCAAAGAAG TTGATGTTCT CCAGGACCAG
ATTGTACACG TAGACATCCA GCTGGAAGCT ACTAACCAGC AGCTGCAGGA AGTAATCATC
AACAGTAACA GAAACAAATA CAAAACAGAA GATGTTTCCG GTTCACTGCG TCTGAAAACG
CCTATCATGG AAATTCCTCA GAATATTCAG GTAATCTCTT CTTCCCTGAT CGCTGATCAG
CAGGCATTCG ATATCGTAGA CGGTGTTACC CGTAACGTGA GTGGCGCTAC CCGTGTTGGT
CACTGGGATA ACCAGTATGC GCAGATCCGT ATGAGAGGTT CTAAAATTCC TGCTTTCCGT
AACGGTATGA ACATCGAAGC GAGCTGGGGT CCTACCGCTG AAGATGCGGG TATGATCGAT
CGTATTGAAT TCGTTAAAGG CCCTGCCGGC TTTATGCTCG CAGCTGGTGA ACCAGGTGGT
TTCTACAATG TAGTCACTAA AAAACCTACC GGTGTTACAC AAGGTTCTGT TAACCTGAGC
ATGGGTAGCT TCAGTACTTA CCGTGCAGCA CTGGACTTTG ACGGTAAACT GAGCAAAGAT
GGTAAACTGC TGTACAGACT GAACACCTCC GCTCAGCAGA AAGACTTCTA TACCAAATAC
AACTATAGCA ACCGTTATAT GATCGCTCCG GTACTGAAAT ACCTGGTAGA CGACAGAACA
TCCATTACAT TGGAATATAC TTTCCAGGGT TCCAAATACC TCGGTAATGG CAACTACCAG
TTCTCTGCAA GAAAACTGCT GGATGAAGGT ATCAACAACG ACTTCTTCTA TGGCGATCCC
TCCCTGGAAC CAGGCCGTCT GAGAGACCAC AGTGCTTACG TATACCTGGA TCACAAACTG
AACGACAAAT GGCAGGCACA CGCGCAGGTA GCTTATTTCA ACTTCAGCAT GGTGGCTAAC
AGCGTATGGG CTAACAGCGT AACACAAAGC GGCGATATGG ACCGTTATTT CAGCATCGGC
GATGAAGCAG GTGAAAACAG ATTCGCACAG TTATCACTGT CTGATGAAGA GTATACCGGT
AAAATCCGCC ACAGAATTCT GGCTGGTATC GATATGGGTA ACAAGAAATT CTGGGGTGAC
TTCCGTACAC TGGATCAGAG CCTGGGCCTG AAAGGTGGTC AGAAGTTCAA TGTATACAAC
CCTGTTTATG GTGTTCCATT TGACTCAATT CCTACTATCG ACCGTTCTAA AAGTGTAAGA
ACAAGAGCCG GCGCAAGCGC TTATCTCTCT TCTGTAAACT ATACTTCTAT ATATGCACAG
GATGAGCTGG CGTTCTTCAA CAACAACCTG CGTCTGTCCC TGGGTATTCG TTTCACCCGT
GCAGAAACAG TAGGTCAGAC CAAAACTGCA AGCCTTCTGA ACAATGTCGT ATCTCCAAGA
GTCGGTCTTA GCTACTCTGT GAATAAATCT ACAACTGTAT ACGCTTTATA TGATCAGTCT
TTCGTTCCTC AGACAGGACT TGATTCCAAC CTGAAAGCAT TCGAACCGGT TAAAGGTAAT
GACATGGAAG CGGGTATCAA GAAAGAATGG TTCCAGGGTC GTTGGATGAC TTCTGTAACA
GCTTACCGTA TTGCCCGTCA GAACGCAAAA GTAGCCCTGG GTATCAAAGA CAGCCGTGGT
GCAGATGTAT CTGAAACACT GGGTGAAACA GTTACCAAGG GTATTGAAGC TGATATCAAC
GGTGAGATCG TACCAGGTCT GAACGTTAAT GTCAACTACG CATATACTAA ATCTAAAGTG
ACTAAAGATG CACCTAACAA AACTGAAGCG AATACAACAG TAGGTAACAT CACTCCTAAT
ACTGCGGCAC ACGTTACTAA CGCGTGGTTA ACTTACCGCT TACGTTCAGG TGTACTGGAA
GGCTTTGGTG TAATGGGTGG TATACAATGG CTGGCAGATC GCGCTTATGG TACTACCAAA
GTATACAATA TGCCTAACTA CTTCCGTGGT GATGCTGGTC TGAGCTATTT AAAAGGTAAA
TACTCTATCT CCGCCCTGGT AAACAACGTG GCAGATAACC GTAAATTGCT GACCGCAGCC
TCGTTCTCTG CAGGCTACTA CAGCTACATT GTAGAAGCAC GTCGTAACTT CCGTCTGACA
GTTGGCTACC GCTTCTGA
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| Protein sequence | MHTKFNRLPG LLCLLCAMFV AMPAFSIDEP LSAIKGKVVT GDGVAVPYVA VQIKERNKGT
VTNEKGEFIF KRMQPGHYTI QVMLMGYKSI TKEVDVLQDQ IVHVDIQLEA TNQQLQEVII
NSNRNKYKTE DVSGSLRLKT PIMEIPQNIQ VISSSLIADQ QAFDIVDGVT RNVSGATRVG
HWDNQYAQIR MRGSKIPAFR NGMNIEASWG PTAEDAGMID RIEFVKGPAG FMLAAGEPGG
FYNVVTKKPT GVTQGSVNLS MGSFSTYRAA LDFDGKLSKD GKLLYRLNTS AQQKDFYTKY
NYSNRYMIAP VLKYLVDDRT SITLEYTFQG SKYLGNGNYQ FSARKLLDEG INNDFFYGDP
SLEPGRLRDH SAYVYLDHKL NDKWQAHAQV AYFNFSMVAN SVWANSVTQS GDMDRYFSIG
DEAGENRFAQ LSLSDEEYTG KIRHRILAGI DMGNKKFWGD FRTLDQSLGL KGGQKFNVYN
PVYGVPFDSI PTIDRSKSVR TRAGASAYLS SVNYTSIYAQ DELAFFNNNL RLSLGIRFTR
AETVGQTKTA SLLNNVVSPR VGLSYSVNKS TTVYALYDQS FVPQTGLDSN LKAFEPVKGN
DMEAGIKKEW FQGRWMTSVT AYRIARQNAK VALGIKDSRG ADVSETLGET VTKGIEADIN
GEIVPGLNVN VNYAYTKSKV TKDAPNKTEA NTTVGNITPN TAAHVTNAWL TYRLRSGVLE
GFGVMGGIQW LADRAYGTTK VYNMPNYFRG DAGLSYLKGK YSISALVNNV ADNRKLLTAA
SFSAGYYSYI VEARRNFRLT VGYRF
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