| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6659 |
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| Symbol | |
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| ID | 8362848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8351869 |
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| End bp | 8353599 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968792 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126264 |
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| Protein GI | 256425611 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.913597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.982088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGA TATTATTCGC GCTATCAATA CTGACGCTGT CCGCCTGTAA GAAGGACTTC
CTCGACAGAC AGCCCATCAG TGACATAGAT CCTGGTTCTT TTTTCAATAA TGAAAAAGAC
CTTACTCTCT ATACCAATAG CTTCTATGCC ATGTTGCCTG GTACTGATAT CTATTCCGCA
GATATTACCA GCGACAATGT GGAACCGGCT GTGATAGGTG ATGTAGTGGC TGGCCGTACC
ATTGTGCAGA CAGATGCATC TGCCGCACAG TGGACCTGGT CGGACCTGCG CAACGTCAAT
TATTTTCTCG CCCATTACCA GAAAGCAGCA GTGAGTGATT CTATTAAAGC ACATTATGCC
GGTATTGCAC GTTTCTTCCG GGCGATGTTT TATTTCACCA AAGTGCAGCG TTTTGGTGAT
GTACCCTGGT ATAGTGATCC GCTGGAAGCG AACAGTCCGG AATTATACAA AGGACGTGAT
CCGCGTAAGC TGGTGGTAGA TAGTATCATT GCTGATCTTA ACTATGCCGC AGCCAATATC
AAAACAGCTA AAAATACTTC CCGTATCACG AAATGGGCCG CACTGGTATT GAAGTCAAGG
GTTTGTCTGT TTGAAGGAAC TTACCGTATT TATCATACTG AAAATAACCA GGGCGGTGCC
ACTGAACTGT TACTGCAAAG TGTGGATGCC GCACAACAGG TGATGCAGAG CGGTTTATAT
AAGTTGTACA CAACGAACAA TCCGAATGTG GATTACGCGA ATCTTTTTAC TGAGGATGTA
GCCAATGCGG ATGAATATAT CCTCGCAAGG GTATATGACC GTACATTGAC TAAAACCCAT
GGTGCTAACG GACAATTTCT GACTTCTACC TTGAGCGCAC CCGGACTGAC CAAAACATTG
ATCAATAGTT ATCTGATGAG TGATGGAACC GCCTTCTCTG CGCAACCTGG TTATGCAACG
ACTCCTTACT GGGAAGAAAT CAAAGGCAGA GATCCCCGTC TGACACAAAC CATCCGCACG
CCTGGTTATA AACGTATCAA TACGACGGCC ACCCTGGTAC CTGATTATTC CAATGCAATG
ACCGGTTACC AGTGTATCAA ATTTGTAACA GGCACTGACC AGGATGGTAA TAATACCAAT
ACAAATGACC TCCCTATATT CAGATATGCG GAAGTATTGT TAAATTATGC GGAAGCAAAA
GCAGAGTTAA AACAATTTGC ACAGGCGGAA GCCGACGCCT CTGTGAATCT GATCCGTAAA
CGTGCTGGTA TGCCGGCAAT GCAGGTCGCT ACATTGAAAG CAGACCCTTT GTTACAGACC
GAGTATAATA TTACTGATCC CGTTATCCTG GAAGTACGCC GTGAAAGAAG AGTAGAGCTG
GCTATGGAAG GATTCCGTTA TCAGGACCTG ATGCGCTGGA AACGGGGACC TTTACTGGCG
CAGGACTTCA AAGGCGCCTG GTTCCCTGGT GTGGGGGTAT ATGACCTGGA TCAGGATGGA
AAGAATGACC TGGCGATTGT ACTAACCAAG CCCGCTTCCC CGGATAAAGC TTTACAGTAT
TTTGTACTGC AACCTGACAG AGGACTGAGT GATGGCGATA AGGGGAACCT GATCGTTCAT
CCAGGTGCTA ATAAACACTT TGACGATCCG AAGCATTATC TGTTTCCTTT ACCACTGACT
GAATTATTAT TAAATACGAA TCTGCAACAG AACCCAGGCT GGGAGCAATA A
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| Protein sequence | MKRILFALSI LTLSACKKDF LDRQPISDID PGSFFNNEKD LTLYTNSFYA MLPGTDIYSA
DITSDNVEPA VIGDVVAGRT IVQTDASAAQ WTWSDLRNVN YFLAHYQKAA VSDSIKAHYA
GIARFFRAMF YFTKVQRFGD VPWYSDPLEA NSPELYKGRD PRKLVVDSII ADLNYAAANI
KTAKNTSRIT KWAALVLKSR VCLFEGTYRI YHTENNQGGA TELLLQSVDA AQQVMQSGLY
KLYTTNNPNV DYANLFTEDV ANADEYILAR VYDRTLTKTH GANGQFLTST LSAPGLTKTL
INSYLMSDGT AFSAQPGYAT TPYWEEIKGR DPRLTQTIRT PGYKRINTTA TLVPDYSNAM
TGYQCIKFVT GTDQDGNNTN TNDLPIFRYA EVLLNYAEAK AELKQFAQAE ADASVNLIRK
RAGMPAMQVA TLKADPLLQT EYNITDPVIL EVRRERRVEL AMEGFRYQDL MRWKRGPLLA
QDFKGAWFPG VGVYDLDQDG KNDLAIVLTK PASPDKALQY FVLQPDRGLS DGDKGNLIVH
PGANKHFDDP KHYLFPLPLT ELLLNTNLQQ NPGWEQ
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