Gene Cpin_6626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6626 
Symbol 
ID8362814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand- 
Start bp8308981 
End bp8309667 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content45% 
IMG OID644968758 
Productcytidylate kinase 
Protein accessionYP_003126231 
Protein GI256425578 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.422792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAGA TTATTATCAC GATCGATGGT TATTCTTCAT GTGGAAAGAG TACGCTGGCA 
AAACAATTGG CAGCGCAGCT GGACTACGTC TACATTGACA GTGGCGCCAT GTATCGTGCA 
ATTACCCTTT ATTTTATTCA GAACCGGGTG GACTGGACAA ACCATGATGC TGTAAAGGAA 
GCTTTACATG ACATCCACCT GGAATTTGAA TTCAACCCGA TCTCTCAGGT CTCTGAAATT 
ACCCTCAACG GGGAAAATGT AGAGCACATG ATCCGGGAAA TGCTCGTCGC GGAGAAAGTG 
AGCGAAGTAG CCGCCGTAAA AGAAGTGCGC GAATTCGCAG TGGCCCAGCA ACAGAAAATG 
GGCGTTAAAA AAGGAATCGT AATGGACGGA AGGGATATCG GTACAACCGT ATTCCCGGAC 
GCAGAACTGA AAATATTCAT GACCGCTGAT GCAGCTATCC GTGTAGAACG CCGTTTTAAG 
GAACTCTATG CGAAAAACAA GAATATCAGC ATTCATGAGG TAAAGGAAAA CCTGGAACTC 
AGGGATTATA TCGATACCAA CCGGGAAATC AGCCCCCTCA GAAAAGCAGA AGATGCCATT 
ATTCTGGATA ACAGCCAACT AAGCCAGGAT GAACAGCTGA AACTGGTAAT TCAGTGGGTA 
GAAGACGCTA CTTTGGTGCA ATCCTGA
 
Protein sequence
MKKIIITIDG YSSCGKSTLA KQLAAQLDYV YIDSGAMYRA ITLYFIQNRV DWTNHDAVKE 
ALHDIHLEFE FNPISQVSEI TLNGENVEHM IREMLVAEKV SEVAAVKEVR EFAVAQQQKM 
GVKKGIVMDG RDIGTTVFPD AELKIFMTAD AAIRVERRFK ELYAKNKNIS IHEVKENLEL 
RDYIDTNREI SPLRKAEDAI ILDNSQLSQD EQLKLVIQWV EDATLVQS