| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6589 |
|---|
| Symbol | |
|---|
| ID | 8362777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8263809 |
|---|
| End bp | 8264615 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644968721 |
|---|
| Product | putative transmembrane protein |
|---|
| Protein accession | YP_003126194 |
|---|
| Protein GI | 256425541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.508374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACC AAGAATATAC GAAAGGAGAT AGCTGGACAA GTGAAAGACA GCAGCGTAAG
GCGGAAAGAC GCCAGCGCCG CATCGAAAGG AAAAGCGAGC ACAGGGAAGG CAGCAGAATC
AACAAAGGCC TGATCTTTAT ACTCATTGGT CTGTTTCTCT TTTTAAGAAG CCTTGACCTC
GCAATGCCTG AGTGGGTATT CTCCTGGCAG CTGCTGCTGA TCGTGATCGG GTGTATCCTC
TGGACAGCCA GTAAGTTTAA AAACTGGGGT GGTCTGATCG TAATGCTGGT AGGTACCGTC
TTCTTCGCCA AAGATTACCT CATGCTGAGC TATGACCTGA CCCGCTTTAT ATGGCCCGCC
ATTTTTGTGA TCGTTGGTCT GGCCATCCTC TTCGGTAAAC GCCAGGAATC TTCCATGAAA
AAAGACCTGC GCGTCATGCC GCCAATGACG TCCTCAGAAG ACTTTATCGA ATCCAATGTC
ATATTCAGCG GAGAAAACAG GTCCGTTGTA TCTAAAGAAT TCAAAGGCGC TAATGTCACC
GCCATCTTCG GTGGTGCGGA CTATAACCTG ATCCAGGCCG ATTTTAAAGA GAGGGTCGAG
TTTGAAGTAA CCTGCATCTT CGGCGGCGTG GAAATCATCC TGCCCAGCAA CTGGGATGTG
CGTATCGAAA TGGATACCGT CATCATGGGC GGTGTGACCG ATAAACGTCC CGTAGAACTC
CTTTCCAATG CCAGCAACTC CGAAAAGATC TTCGTACTCA GAGGTACCTG CATCTTTGGT
GGCGTGGAGA TCAGGAACTA TGTCTGA
|
|---|
| Protein sequence | MDNQEYTKGD SWTSERQQRK AERRQRRIER KSEHREGSRI NKGLIFILIG LFLFLRSLDL
AMPEWVFSWQ LLLIVIGCIL WTASKFKNWG GLIVMLVGTV FFAKDYLMLS YDLTRFIWPA
IFVIVGLAIL FGKRQESSMK KDLRVMPPMT SSEDFIESNV IFSGENRSVV SKEFKGANVT
AIFGGADYNL IQADFKERVE FEVTCIFGGV EIILPSNWDV RIEMDTVIMG GVTDKRPVEL
LSNASNSEKI FVLRGTCIFG GVEIRNYV
|
|---|
| |