| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6560 |
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| Symbol | |
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| ID | 8362745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8227138 |
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| End bp | 8228454 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968689 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_003126165 |
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| Protein GI | 256425512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.13532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACA CCGCAACTAC GCTTGCTGCG CCAAAACAGG CCAGCTATGT ACAATCGCTC
CTTATTCTGG GGGTTCTCTA TTTCATGCTT GGTTTTATCA CGTGGGTAAA TGCTACGTTG
ATCCCGTTTC TGCAGTTATC CTGTCAGCTG ACCATTGCGG AAGCTTTGCT GGTGACATTT
GCTTCTTACC TGGGATATTT CTTCCTGGCG ATCCCTTCTT CTTTCATCAT CAAGAAGACC
GGCTTTAAAA ACGGTATGGC CTATAGCCTT GTGATTATCG CAGCTGGTTG CCTGATCTTC
ATTCCGGCGG CCAACACACG TAATTTCGGC CTTTTCCTGG CTGGCCTTTT CATACAGGGG
ATGGGTATGT CTCTGTTACA AACGGCTTCC AACCCTTATG TGAGCATTAT CGGACCTATT
GAAAGTGCGG CTAAACGTAT CAGTATAATG GGTATCTGTA ATAAGATCGC GGGTACGATA
AGTCCGCTGA TCCTGGCTTC TATCATCCTC AAAGATGCAG AAGGGCTGGA AAAACAGATC
GCTGCTACTA CAGATGCAGT GGTTAAAAGT GGTTTACTGG ACAGCCTGGC TTCCAGGGTG
ATCCTTCCTT ATATCGTGCT GGCCGTGATC CTGGTAGGAC TGGCAGTAGC AATTAATCGT
TCTTCTCTTC CGGAAATAGA TACTGACAAC AAATCTGTGG ATAATGAAGG TAAAACCGTT
ACCGACAGCA GGAACAGCAT TTTCCAGTAT CCTTACCTGT TGCTGGGTGC GTTGTGTATC
TTCATGTATG TGGGTGTGGA AGTAATGGCC GGCGATGTGA TCGGTACTTA TGGCCGTGAG
CTGGGTATGA GCCTTGACAA AACTAAATAT TTCACCACAT TTACGCTGGC AGCCATGCTG
GTAGGTTATG TCGTAGGTAT CATCGCTATT CCGAAATACT TGTCTCAGGA TATGAGTCTG
CGTATATGTG CGATCCTGGG TATATTATTC ACAGCCTGTG CATTCATGAC CAGTGGCTAC
GTAGCAGTTA CTTTCATCGC TTTACTGGGT CTCGCGAATT CACTGATGTG GCCTGCTATT
TTCCCGCTGG CGATTGAAAA GCTGGGTAGC TTTACCAAGC TGGGTTCTGC TTTCCTGATC
ATGGGTATTG TTGGTGGTGG CATACTGCCA CAGATCTTCT CCCGTCTGTA CAACCCGGAG
AGCTTCATTT ATGTACAGGG AATGGACTTC AGACATGCCT TCCTGTATTG TATGGTACCA
GGTTACCTCT ACATCCTGTA CTACGCACTG GCAGGACATA AAGTTGGTAA AAGATAA
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| Protein sequence | MSNTATTLAA PKQASYVQSL LILGVLYFML GFITWVNATL IPFLQLSCQL TIAEALLVTF
ASYLGYFFLA IPSSFIIKKT GFKNGMAYSL VIIAAGCLIF IPAANTRNFG LFLAGLFIQG
MGMSLLQTAS NPYVSIIGPI ESAAKRISIM GICNKIAGTI SPLILASIIL KDAEGLEKQI
AATTDAVVKS GLLDSLASRV ILPYIVLAVI LVGLAVAINR SSLPEIDTDN KSVDNEGKTV
TDSRNSIFQY PYLLLGALCI FMYVGVEVMA GDVIGTYGRE LGMSLDKTKY FTTFTLAAML
VGYVVGIIAI PKYLSQDMSL RICAILGILF TACAFMTSGY VAVTFIALLG LANSLMWPAI
FPLAIEKLGS FTKLGSAFLI MGIVGGGILP QIFSRLYNPE SFIYVQGMDF RHAFLYCMVP
GYLYILYYAL AGHKVGKR
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