| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6547 |
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| Symbol | |
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| ID | 8362732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8210045 |
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| End bp | 8212420 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968676 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003126152 |
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| Protein GI | 256425499 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.32752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAT TTTTATTCCT TTTGCTGCTC TGCAGCTTAA GTACTGTGCA TGCGCAAACT
GTGCTGACCG GAGTCGTTAC CAACAAATCC AACGGAAAAC CGCTGGAAGG TGTTTCCGTA
AGTATCCCCT CCACCAACGC TGGTATGCAT ACCAACGCCA ATGGTCAATA CCGCTTTACT
ATTCCGTCTA AAGGTCAGTA TACCTTACAG GTGAGCTACC TCGGATACAA ACAGTTGACC
ACGAACATCA ACGCGACTGG TAATACCATC CAGACAGATT TTTCGCTGGA AGAAACCGGT
CTCTTTGTAA AACCTGTTGA GATCTCCAGT CTCCGTGTGG GAGAACATGC TCCTTTCACA
CAATCTACCC TGACTGCAGA AGAGATCAAA AAACAGAACC TGGGTCAGGA CCTGCCCCTG
CTGCTGAATC AGCTCCCAGG CGTAGTAACC AACTCCGACG CTGGTACAGG TATCGGTTAT
ACCGGCATCC GTGTCAGAGG ATCTGATATC ACGCGTATCA ACGTTACTGC CAATGGTATT
CCTATCAATG ACGCGGAATC ACAGGGTACT TTCTTTGTAA ATATGCCCGA TTTCGCTTCT
TCTGTAAGCA GTATACAATT ACAACGGGGT GTAGGTACAT CTACCAACGG AGCTGGTGCT
TTCGGCGCTT CGCTCAATCT CAGCACCAAC GATTTCAGAG ATAAAGCATA CGCAGAAGTT
AACAGCAGTG TCGGATCTTA CAACTCCTGG AAAAACACCG TAAAAGTAGG CTCCGGATTA
ATCAATAACC ATTTCACCAT CGACGCCAGA TTATCCAAAA TATCTTCTGA TGGTTACATG
GATCGTGCCT CTTCTGACCT GAAATCTTTC TATACTTCTG CGGCTTATAT TTCGAAGAAT
ACCGCTATCC GTCTGAACGT ATTTTCCGGT AAGGAAAAAA CCTACCAGGC ATGGAACGGC
GTGCCTCTCG ACTCACTGAA GACACACCGT ACCTACAATT CCGCAGGCCA AAAATCTGAC
GGTACTTACT ACGACAACGA AACAGACAAC TATCAACAGG ACCATTACCA GTTATTCCTG
AACCAGTCAC TGAGCAGTAA ACTGGACTTC AACGTGGCTG CACACTACAC CCGTGGCAGA
GGTTACTACG AACAGTACCG CGAACAGGAA GCCTTTGCTG ATTACGGCAT CACAGATCCT
GTGATCAACG GCGCTCCTGT GACACATACA GATCTCATCA GACAACTCTG GCTGGACAAC
CACTTCTACG GTGGCATCTT CTCCGTAAAC TACAAAGGCG ATAAACTGAG CTGGAGCCTG
GGTGGCGGAT GGAACCGCTA TGAAGGCGGT CACTATGGTA AGATCATCTG GGCGCAATAC
CCGATCGATA AAGACCACAA ATACTACGAC AACGACGCAT TCAAACGCGA TCTGAACGTA
TACTGGAAAG GACAATATAA AATCACTTCC GCATTACGCC TGTTTGCAGA CCTGCAATAC
CGCACCGTAC AATACAACAT CGACGGATTC GATAAAAATC CTTCCCTGAT ACAACATAAT
GATTACAACT TCTTCAATCC GAAAGCAGGT ATTTCTTACA CGCTGAACGA TCGTCAGGAA
GTATACGCCT CCTTTGCTGT GGGCAACAAA GAACCTAACC GCGACGACTT CGAAGCAGGT
GTAAATAACA CCCCTAAACA TGAAACACTG CGCGATGTAG AAGCTGGTTA TACTTACCGC
ACCGGTAACA TCGTGTTGCA GGCAAATGCC TACTACATGA ACTATAAAAA CCAGCTGGTA
CAAACCGGGA AACTGAACGA TGTAGGCGCT TATACCCGCA CCAACATTCC TAAAAGCTAC
CGCGCCGGTA TCGAATTACA AGGTAGCACC CGCCTGGGCC GCCTGTTTAC GCTTTCTGCG
AATGCAGCCT TCAGCCGCAA CAAGGTGCAG AACTTCCAGT ATTTTATCGA CAATTTTGAC
ACCGGTGCAC AGGATACCGT TGTTTACAAC AGCACCAACA TCGCCTTCTC CCCTTCTTTT
GTAGGCGGTT ATAACTTGTC TGCAAGACCA GTGAAGAATC TGGAAGTAAG CCTGATCGGT
AAGTATGTCA GCAGACAATA CCTCGACAAC TCGGAAGTAA AAGAACGCAG CCTGGACGGT
TATTATACCA ATGACCTGCG CTTCAACTAC ATCATTCCTC AGCCTCTCTT TAAAGAACTG
GGTATTCAGT TCGTGCTGAA CAATATCTGG AATAAGAAGT ACGCTCCTAA CGGATGGACC
TATGCATTTA AAGAGGAAGG TGTCGAAAAA TCGTCTAACG GATATTATCC GATGGCTGGC
ACCAATTTCT TTGCCGGCAT TAATATAGCC TTCTAA
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| Protein sequence | MRQFLFLLLL CSLSTVHAQT VLTGVVTNKS NGKPLEGVSV SIPSTNAGMH TNANGQYRFT
IPSKGQYTLQ VSYLGYKQLT TNINATGNTI QTDFSLEETG LFVKPVEISS LRVGEHAPFT
QSTLTAEEIK KQNLGQDLPL LLNQLPGVVT NSDAGTGIGY TGIRVRGSDI TRINVTANGI
PINDAESQGT FFVNMPDFAS SVSSIQLQRG VGTSTNGAGA FGASLNLSTN DFRDKAYAEV
NSSVGSYNSW KNTVKVGSGL INNHFTIDAR LSKISSDGYM DRASSDLKSF YTSAAYISKN
TAIRLNVFSG KEKTYQAWNG VPLDSLKTHR TYNSAGQKSD GTYYDNETDN YQQDHYQLFL
NQSLSSKLDF NVAAHYTRGR GYYEQYREQE AFADYGITDP VINGAPVTHT DLIRQLWLDN
HFYGGIFSVN YKGDKLSWSL GGGWNRYEGG HYGKIIWAQY PIDKDHKYYD NDAFKRDLNV
YWKGQYKITS ALRLFADLQY RTVQYNIDGF DKNPSLIQHN DYNFFNPKAG ISYTLNDRQE
VYASFAVGNK EPNRDDFEAG VNNTPKHETL RDVEAGYTYR TGNIVLQANA YYMNYKNQLV
QTGKLNDVGA YTRTNIPKSY RAGIELQGST RLGRLFTLSA NAAFSRNKVQ NFQYFIDNFD
TGAQDTVVYN STNIAFSPSF VGGYNLSARP VKNLEVSLIG KYVSRQYLDN SEVKERSLDG
YYTNDLRFNY IIPQPLFKEL GIQFVLNNIW NKKYAPNGWT YAFKEEGVEK SSNGYYPMAG
TNFFAGINIA F
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